Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 WBP11P1-201ENST00000562560 1931 ntBASIC6.68□□□□□ -1.34
CCNB1IP1Q9NPC3 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
CCNB1IP1Q9NPC3 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CCNB1IP1Q9NPC3 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CCNB1IP1Q9NPC3 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.68□□□□□ -1.34
CCNB1IP1Q9NPC3 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC6.67□□□□□ -1.34
CCNB1IP1Q9NPC3 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CCNB1IP1Q9NPC3 LARS-212ENST00000510191 3737 ntTSL 2 BASIC6.67□□□□□ -1.34
CCNB1IP1Q9NPC3 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CCNB1IP1Q9NPC3 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.67□□□□□ -1.34
CCNB1IP1Q9NPC3 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC6.67□□□□□ -1.34
CCNB1IP1Q9NPC3 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
CCNB1IP1Q9NPC3 LINC01103-201ENST00000430551 1457 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CCNB1IP1Q9NPC3 ELOC-205ENST00000520210 1451 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CCNB1IP1Q9NPC3 AL355306.2-201ENST00000635570 1542 ntTSL 5 BASIC6.67□□□□□ -1.34
CCNB1IP1Q9NPC3 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC6.67□□□□□ -1.34
CCNB1IP1Q9NPC3 MTRF1-203ENST00000379480 2185 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CCNB1IP1Q9NPC3 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
CCNB1IP1Q9NPC3 RN7SKP89-201ENST00000410774 242 ntBASIC6.67□□□□□ -1.34
CCNB1IP1Q9NPC3 GEMIN2P2-201ENST00000418195 715 ntBASIC6.67□□□□□ -1.34
CCNB1IP1Q9NPC3 AL109924.2-201ENST00000419800 934 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CCNB1IP1Q9NPC3 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.67□□□□□ -1.34
CCNB1IP1Q9NPC3 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC6.67□□□□□ -1.34
CCNB1IP1Q9NPC3 AL606752.1-201ENST00000435442 666 ntBASIC6.67□□□□□ -1.34
CCNB1IP1Q9NPC3 AL121885.2-201ENST00000440255 819 ntTSL 3 BASIC6.67□□□□□ -1.34
CCNB1IP1Q9NPC3 PGM5P3-AS1-202ENST00000442069 615 ntTSL 2 BASIC6.67□□□□□ -1.34
CCNB1IP1Q9NPC3 SLC8A1-AS1-207ENST00000444629 935 ntTSL 3 BASIC6.67□□□□□ -1.34
CCNB1IP1Q9NPC3 LINC01320-202ENST00000453774 1205 ntTSL 3 BASIC6.67□□□□□ -1.34
CCNB1IP1Q9NPC3 KIF3AP1-201ENST00000454055 611 ntBASIC6.67□□□□□ -1.34
CCNB1IP1Q9NPC3 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC6.67□□□□□ -1.34
CCNB1IP1Q9NPC3 FTH1P8-201ENST00000498161 514 ntBASIC6.67□□□□□ -1.34
CCNB1IP1Q9NPC3 AC021491.1-201ENST00000502300 349 ntTSL 5 BASIC6.67□□□□□ -1.34
CCNB1IP1Q9NPC3 AP004833.1-201ENST00000507987 1238 ntBASIC6.67□□□□□ -1.34
CCNB1IP1Q9NPC3 RPL10P18-201ENST00000519384 309 ntBASIC6.67□□□□□ -1.34
CCNB1IP1Q9NPC3 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC6.67□□□□□ -1.34
CCNB1IP1Q9NPC3 OR4A1P-201ENST00000532342 920 ntBASIC6.67□□□□□ -1.34
CCNB1IP1Q9NPC3 LINC02385-201ENST00000547554 428 ntTSL 5 BASIC6.67□□□□□ -1.34
CCNB1IP1Q9NPC3 IGHV1OR15-3-201ENST00000564926 351 ntBASIC6.67□□□□□ -1.34
CCNB1IP1Q9NPC3 MIR4301-201ENST00000577203 66 ntBASIC6.67□□□□□ -1.34
CCNB1IP1Q9NPC3 AC007136.1-201ENST00000589141 199 ntBASIC6.67□□□□□ -1.34
CCNB1IP1Q9NPC3 ANKRD20A19P-203ENST00000602724 295 ntBASIC6.67□□□□□ -1.34
CCNB1IP1Q9NPC3 AC083964.1-201ENST00000607549 630 ntBASIC6.67□□□□□ -1.34
CCNB1IP1Q9NPC3 MED24-234ENST00000614384 454 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CCNB1IP1Q9NPC3 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC6.67□□□□□ -1.34
CCNB1IP1Q9NPC3 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CCNB1IP1Q9NPC3 ATP5A1P10-201ENST00000622403 1603 ntBASIC6.67□□□□□ -1.34
CCNB1IP1Q9NPC3 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC6.67□□□□□ -1.34
CCNB1IP1Q9NPC3 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CCNB1IP1Q9NPC3 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CCNB1IP1Q9NPC3 AC093909.4-201ENST00000514297 1991 ntTSL 5 BASIC6.67□□□□□ -1.34
CCNB1IP1Q9NPC3 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC6.67□□□□□ -1.34
CCNB1IP1Q9NPC3 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.67□□□□□ -1.34
CCNB1IP1Q9NPC3 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CCNB1IP1Q9NPC3 R3HCC1L-206ENST00000613938 1397 ntTSL 5 BASIC6.67□□□□□ -1.34
CCNB1IP1Q9NPC3 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CCNB1IP1Q9NPC3 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CCNB1IP1Q9NPC3 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CCNB1IP1Q9NPC3 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC6.67□□□□□ -1.34
CCNB1IP1Q9NPC3 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CCNB1IP1Q9NPC3 RPS20-205ENST00000519807 1826 ntTSL 2 BASIC6.66□□□□□ -1.34
CCNB1IP1Q9NPC3 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC6.66□□□□□ -1.34
CCNB1IP1Q9NPC3 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
CCNB1IP1Q9NPC3 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CCNB1IP1Q9NPC3 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CCNB1IP1Q9NPC3 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CCNB1IP1Q9NPC3 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CCNB1IP1Q9NPC3 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CCNB1IP1Q9NPC3 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CCNB1IP1Q9NPC3 AC127070.3-201ENST00000503695 3263 ntBASIC6.66□□□□□ -1.34
CCNB1IP1Q9NPC3 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
CCNB1IP1Q9NPC3 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CCNB1IP1Q9NPC3 RPL12P13-201ENST00000310055 497 ntBASIC6.66□□□□□ -1.34
CCNB1IP1Q9NPC3 AL590762.1-201ENST00000391782 432 ntBASIC6.66□□□□□ -1.34
CCNB1IP1Q9NPC3 AC007422.2-201ENST00000419809 167 ntTSL 3 BASIC6.66□□□□□ -1.34
CCNB1IP1Q9NPC3 AL513304.1-201ENST00000432987 359 ntTSL 3 BASIC6.66□□□□□ -1.34
CCNB1IP1Q9NPC3 AL607028.1-201ENST00000433455 794 ntTSL 3 BASIC6.66□□□□□ -1.34
CCNB1IP1Q9NPC3 LINC01852-201ENST00000434223 967 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CCNB1IP1Q9NPC3 AC092167.1-201ENST00000435466 495 ntTSL 4 BASIC6.66□□□□□ -1.34
CCNB1IP1Q9NPC3 AC244021.2-201ENST00000445260 529 ntTSL 5 BASIC6.66□□□□□ -1.34
CCNB1IP1Q9NPC3 AC092687.2-201ENST00000452909 568 ntTSL 5 BASIC6.66□□□□□ -1.34
CCNB1IP1Q9NPC3 AC127024.1-201ENST00000490847 418 ntBASIC6.66□□□□□ -1.34
CCNB1IP1Q9NPC3 AC114801.1-201ENST00000512633 297 ntBASIC6.66□□□□□ -1.34
CCNB1IP1Q9NPC3 AC053513.1-201ENST00000543604 738 ntTSL 3 BASIC6.66□□□□□ -1.34
CCNB1IP1Q9NPC3 AL355076.3-201ENST00000555838 587 ntBASIC6.66□□□□□ -1.34
CCNB1IP1Q9NPC3 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC6.66□□□□□ -1.34
CCNB1IP1Q9NPC3 MIR3689C-201ENST00000581239 72 ntBASIC6.66□□□□□ -1.34
CCNB1IP1Q9NPC3 AC093503.1-202ENST00000598743 478 ntTSL 5 BASIC6.66□□□□□ -1.34
CCNB1IP1Q9NPC3 KDM5DP1-201ENST00000622542 298 ntBASIC6.66□□□□□ -1.34
CCNB1IP1Q9NPC3 AC034229.6-201ENST00000623704 224 ntBASIC6.66□□□□□ -1.34
CCNB1IP1Q9NPC3 AC233280.20-201ENST00000637412 416 ntBASIC6.66□□□□□ -1.34
CCNB1IP1Q9NPC3 MED6-212ENST00000615788 1700 ntTSL 5 BASIC6.66□□□□□ -1.34
CCNB1IP1Q9NPC3 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC6.66□□□□□ -1.34
CCNB1IP1Q9NPC3 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CCNB1IP1Q9NPC3 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.66□□□□□ -1.34
CCNB1IP1Q9NPC3 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.66□□□□□ -1.34
CCNB1IP1Q9NPC3 FO082842.1-201ENST00000423552 1370 ntBASIC6.66□□□□□ -1.34
CCNB1IP1Q9NPC3 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
CCNB1IP1Q9NPC3 AC132219.2-201ENST00000624416 2327 ntBASIC6.66□□□□□ -1.34
CCNB1IP1Q9NPC3 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
CCNB1IP1Q9NPC3 NPL-212ENST00000614468 2376 ntTSL 5 BASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms