Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AJ009632.1-201ENST00000433588 1376 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
CCDC50Q8IVM0 TRIM60P14-201ENST00000513444 1419 ntBASIC7.66□□□□□ -1.18
CCDC50Q8IVM0 NUMB-231ENST00000559312 1439 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
CCDC50Q8IVM0 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
CCDC50Q8IVM0 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
CCDC50Q8IVM0 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
CCDC50Q8IVM0 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
CCDC50Q8IVM0 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
CCDC50Q8IVM0 CCNC-204ENST00000482541 1704 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
CCDC50Q8IVM0 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CCDC50Q8IVM0 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CCDC50Q8IVM0 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
CCDC50Q8IVM0 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
CCDC50Q8IVM0 CLCN3-202ENST00000360642 3208 ntTSL 2 BASIC7.65□□□□□ -1.18
CCDC50Q8IVM0 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.18
CCDC50Q8IVM0 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC7.65□□□□□ -1.18
CCDC50Q8IVM0 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC7.65□□□□□ -1.18
CCDC50Q8IVM0 RBMX2P2-201ENST00000257020 946 ntBASIC7.65□□□□□ -1.18
CCDC50Q8IVM0 OR51L1-201ENST00000321543 948 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
CCDC50Q8IVM0 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
CCDC50Q8IVM0 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
CCDC50Q8IVM0 RNA5SP218-201ENST00000363188 109 ntBASIC7.65□□□□□ -1.18
CCDC50Q8IVM0 MTMR8-201ENST00000374852 2639 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
CCDC50Q8IVM0 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
CCDC50Q8IVM0 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
CCDC50Q8IVM0 CNPY1-202ENST00000406197 560 ntTSL 5 BASIC7.65□□□□□ -1.18
CCDC50Q8IVM0 MIR1204-201ENST00000408388 67 ntBASIC7.65□□□□□ -1.18
CCDC50Q8IVM0 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
CCDC50Q8IVM0 AC145625.1-201ENST00000441444 592 ntTSL 4 BASIC7.65□□□□□ -1.18
CCDC50Q8IVM0 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
CCDC50Q8IVM0 AC022400.2-201ENST00000446730 866 ntTSL 2 BASIC7.65□□□□□ -1.18
CCDC50Q8IVM0 SERPINA9-205ENST00000448305 1520 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
CCDC50Q8IVM0 CDC42P2-201ENST00000448566 569 ntBASIC7.65□□□□□ -1.18
CCDC50Q8IVM0 FGF12-AS3-201ENST00000452848 291 ntTSL 3 BASIC7.65□□□□□ -1.18
CCDC50Q8IVM0 AC007879.2-201ENST00000454444 551 ntTSL 4 BASIC7.65□□□□□ -1.18
CCDC50Q8IVM0 ASNS-214ENST00000455086 1588 ntTSL 2 BASIC7.65□□□□□ -1.18
CCDC50Q8IVM0 HDAC1P1-201ENST00000455482 1445 ntBASIC7.65□□□□□ -1.18
CCDC50Q8IVM0 AL021396.1-202ENST00000457707 1929 ntTSL 2 BASIC7.65□□□□□ -1.18
CCDC50Q8IVM0 LINC01994-201ENST00000496220 1808 ntTSL 2 BASIC7.65□□□□□ -1.18
CCDC50Q8IVM0 MTND6P8-201ENST00000503471 522 ntBASIC7.65□□□□□ -1.18
CCDC50Q8IVM0 AC111194.1-201ENST00000509711 422 ntTSL 3 BASIC7.65□□□□□ -1.18
CCDC50Q8IVM0 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC7.65□□□□□ -1.18
CCDC50Q8IVM0 AC026700.1-201ENST00000512074 544 ntBASIC7.65□□□□□ -1.18
CCDC50Q8IVM0 ST13P6-201ENST00000522430 1102 ntBASIC7.65□□□□□ -1.18
CCDC50Q8IVM0 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.18
CCDC50Q8IVM0 AC069360.1-202ENST00000533941 557 ntTSL 3 BASIC7.65□□□□□ -1.18
CCDC50Q8IVM0 GPR19-203ENST00000540510 1751 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.18
CCDC50Q8IVM0 PRB1-203ENST00000545626 710 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
CCDC50Q8IVM0 LINC00469-203ENST00000579749 583 ntTSL 5 BASIC7.65□□□□□ -1.18
CCDC50Q8IVM0 AC005154.1-216ENST00000582145 1101 ntTSL 5 BASIC7.65□□□□□ -1.18
CCDC50Q8IVM0 AC011591.1-201ENST00000591379 518 ntTSL 2 BASIC7.65□□□□□ -1.18
CCDC50Q8IVM0 ZNF730-201ENST00000593635 464 ntTSL 3 BASIC7.65□□□□□ -1.18
CCDC50Q8IVM0 AC074135.1-202ENST00000600223 563 ntTSL 3 BASIC7.65□□□□□ -1.18
CCDC50Q8IVM0 AC080112.3-201ENST00000612552 880 ntBASIC7.65□□□□□ -1.18
CCDC50Q8IVM0 AL121809.2-201ENST00000613169 341 ntBASIC7.65□□□□□ -1.18
CCDC50Q8IVM0 AC138904.2-201ENST00000614412 107 ntBASIC7.65□□□□□ -1.18
CCDC50Q8IVM0 AL669830.1-201ENST00000621457 656 ntBASIC7.65□□□□□ -1.18
CCDC50Q8IVM0 METAP1-212ENST00000625963 147 ntTSL 5 BASIC7.65□□□□□ -1.18
CCDC50Q8IVM0 TTN-AS1-265ENST00000627661 806 ntTSL 5 BASIC7.65□□□□□ -1.18
CCDC50Q8IVM0 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
CCDC50Q8IVM0 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC7.65□□□□□ -1.19
CCDC50Q8IVM0 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
CCDC50Q8IVM0 KIAA0753-207ENST00000572370 3263 ntAPPRIS ALT2 TSL 2 BASIC7.65□□□□□ -1.19
CCDC50Q8IVM0 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.19
CCDC50Q8IVM0 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
CCDC50Q8IVM0 SLC39A12-203ENST00000377374 2639 ntAPPRIS P3 TSL 2 BASIC7.65□□□□□ -1.19
CCDC50Q8IVM0 OLR1-201ENST00000309539 2462 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CCDC50Q8IVM0 PBLD-203ENST00000336578 2449 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
CCDC50Q8IVM0 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
CCDC50Q8IVM0 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC7.64□□□□□ -1.19
CCDC50Q8IVM0 ENO1P4-201ENST00000416471 1785 ntBASIC7.64□□□□□ -1.19
CCDC50Q8IVM0 GTPBP10-202ENST00000257659 1740 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
CCDC50Q8IVM0 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
CCDC50Q8IVM0 WASF5P-205ENST00000428639 1455 ntBASIC7.64□□□□□ -1.19
CCDC50Q8IVM0 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC7.64□□□□□ -1.19
CCDC50Q8IVM0 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC7.64□□□□□ -1.19
CCDC50Q8IVM0 ZFP62-207ENST00000512132 4010 ntTSL 2 BASIC7.64□□□□□ -1.19
CCDC50Q8IVM0 OR10AD1-201ENST00000310248 1305 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
CCDC50Q8IVM0 OR5P3-201ENST00000328375 936 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
CCDC50Q8IVM0 RN7SKP63-201ENST00000363187 301 ntBASIC7.64□□□□□ -1.19
CCDC50Q8IVM0 RNU1-21P-201ENST00000363327 163 ntBASIC7.64□□□□□ -1.19
CCDC50Q8IVM0 RPL24-201ENST00000394077 623 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CCDC50Q8IVM0 TOMM6-201ENST00000398881 595 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CCDC50Q8IVM0 OR4F7P-201ENST00000402444 931 ntBASIC7.64□□□□□ -1.19
CCDC50Q8IVM0 OR4F1P-201ENST00000405102 938 ntBASIC7.64□□□□□ -1.19
CCDC50Q8IVM0 RN7SKP131-201ENST00000410698 301 ntBASIC7.64□□□□□ -1.19
CCDC50Q8IVM0 RN7SKP89-201ENST00000410774 242 ntBASIC7.64□□□□□ -1.19
CCDC50Q8IVM0 AC069213.1-202ENST00000417011 810 ntTSL 2 BASIC7.64□□□□□ -1.19
CCDC50Q8IVM0 AL138828.1-207ENST00000417643 734 ntTSL 5 BASIC7.64□□□□□ -1.19
CCDC50Q8IVM0 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC7.64□□□□□ -1.19
CCDC50Q8IVM0 OR4F2P-201ENST00000424047 938 ntBASIC7.64□□□□□ -1.19
CCDC50Q8IVM0 AC244505.2-201ENST00000435089 759 ntBASIC7.64□□□□□ -1.19
CCDC50Q8IVM0 AC073115.1-201ENST00000436056 532 ntTSL 4 BASIC7.64□□□□□ -1.19
CCDC50Q8IVM0 FUNDC2P2-202ENST00000443452 493 ntBASIC7.64□□□□□ -1.19
CCDC50Q8IVM0 CMAHP-203ENST00000458373 1101 ntTSL 5 BASIC7.64□□□□□ -1.19
CCDC50Q8IVM0 RPS18P13-201ENST00000461260 454 ntBASIC7.64□□□□□ -1.19
CCDC50Q8IVM0 RN7SL251P-201ENST00000464175 297 ntBASIC7.64□□□□□ -1.19
CCDC50Q8IVM0 LINC02024-202ENST00000493545 483 ntTSL 3 BASIC7.64□□□□□ -1.19
CCDC50Q8IVM0 RPL23AP82-208ENST00000496652 1112 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
CCDC50Q8IVM0 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC7.64□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 314.3 ms