Protein–RNA interactions for Protein: Q9WU28

Pfdn5, Prefoldin subunit 5, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn5Q9WU28 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pfdn5Q9WU28 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pfdn5Q9WU28 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pfdn5Q9WU28 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pfdn5Q9WU28 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pfdn5Q9WU28 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pfdn5Q9WU28 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pfdn5Q9WU28 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pfdn5Q9WU28 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC14.24□□□□□ -0.13
Pfdn5Q9WU28 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pfdn5Q9WU28 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC14.24□□□□□ -0.13
Pfdn5Q9WU28 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pfdn5Q9WU28 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC14.24□□□□□ -0.13
Pfdn5Q9WU28 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.24□□□□□ -0.13
Pfdn5Q9WU28 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pfdn5Q9WU28 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pfdn5Q9WU28 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pfdn5Q9WU28 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pfdn5Q9WU28 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pfdn5Q9WU28 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Pfdn5Q9WU28 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC14.24□□□□□ -0.13
Pfdn5Q9WU28 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pfdn5Q9WU28 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pfdn5Q9WU28 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pfdn5Q9WU28 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pfdn5Q9WU28 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pfdn5Q9WU28 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pfdn5Q9WU28 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pfdn5Q9WU28 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pfdn5Q9WU28 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC14.24□□□□□ -0.13
Pfdn5Q9WU28 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pfdn5Q9WU28 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pfdn5Q9WU28 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pfdn5Q9WU28 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Pfdn5Q9WU28 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pfdn5Q9WU28 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Pfdn5Q9WU28 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pfdn5Q9WU28 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC14.23□□□□□ -0.13
Pfdn5Q9WU28 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC14.23□□□□□ -0.13
Pfdn5Q9WU28 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pfdn5Q9WU28 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC14.23□□□□□ -0.13
Pfdn5Q9WU28 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC14.23□□□□□ -0.13
Pfdn5Q9WU28 AC140930.3-201ENSMUST00000222935 274 ntBASIC14.23□□□□□ -0.13
Pfdn5Q9WU28 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pfdn5Q9WU28 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pfdn5Q9WU28 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Pfdn5Q9WU28 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Pfdn5Q9WU28 AC121961.1-201ENSMUST00000218594 1779 ntBASIC14.23□□□□□ -0.13
Pfdn5Q9WU28 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pfdn5Q9WU28 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pfdn5Q9WU28 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pfdn5Q9WU28 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pfdn5Q9WU28 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pfdn5Q9WU28 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Pfdn5Q9WU28 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pfdn5Q9WU28 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pfdn5Q9WU28 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pfdn5Q9WU28 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pfdn5Q9WU28 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pfdn5Q9WU28 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pfdn5Q9WU28 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pfdn5Q9WU28 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pfdn5Q9WU28 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC14.22□□□□□ -0.13
Pfdn5Q9WU28 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pfdn5Q9WU28 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pfdn5Q9WU28 Gm8493-201ENSMUST00000196881 489 ntBASIC14.22□□□□□ -0.13
Pfdn5Q9WU28 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pfdn5Q9WU28 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pfdn5Q9WU28 AC107452.1-201ENSMUST00000227963 481 ntBASIC14.22□□□□□ -0.13
Pfdn5Q9WU28 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pfdn5Q9WU28 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Pfdn5Q9WU28 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pfdn5Q9WU28 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.22□□□□□ -0.13
Pfdn5Q9WU28 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pfdn5Q9WU28 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pfdn5Q9WU28 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pfdn5Q9WU28 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pfdn5Q9WU28 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pfdn5Q9WU28 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.22□□□□□ -0.13
Pfdn5Q9WU28 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pfdn5Q9WU28 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pfdn5Q9WU28 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pfdn5Q9WU28 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pfdn5Q9WU28 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Pfdn5Q9WU28 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pfdn5Q9WU28 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pfdn5Q9WU28 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pfdn5Q9WU28 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Pfdn5Q9WU28 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pfdn5Q9WU28 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pfdn5Q9WU28 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pfdn5Q9WU28 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pfdn5Q9WU28 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pfdn5Q9WU28 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pfdn5Q9WU28 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pfdn5Q9WU28 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pfdn5Q9WU28 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pfdn5Q9WU28 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pfdn5Q9WU28 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pfdn5Q9WU28 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms