Protein–RNA interactions for Protein: Q9R0S3

Mmp17, Matrix metalloproteinase-17, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp17Q9R0S3 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Mmp17Q9R0S3 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Mmp17Q9R0S3 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
Mmp17Q9R0S3 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Mmp17Q9R0S3 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Mmp17Q9R0S3 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Mmp17Q9R0S3 Umpk-ps-201ENSMUST00000211897 827 ntBASIC16.05■□□□□ 0.16
Mmp17Q9R0S3 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Mmp17Q9R0S3 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Mmp17Q9R0S3 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
Mmp17Q9R0S3 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Mmp17Q9R0S3 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Mmp17Q9R0S3 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Mmp17Q9R0S3 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.05■□□□□ 0.16
Mmp17Q9R0S3 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.05■□□□□ 0.16
Mmp17Q9R0S3 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Mmp17Q9R0S3 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Mmp17Q9R0S3 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Mmp17Q9R0S3 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Mmp17Q9R0S3 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Mmp17Q9R0S3 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Mmp17Q9R0S3 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Mmp17Q9R0S3 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Mmp17Q9R0S3 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Mmp17Q9R0S3 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Mmp17Q9R0S3 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Mmp17Q9R0S3 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Mmp17Q9R0S3 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Mmp17Q9R0S3 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Mmp17Q9R0S3 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Mmp17Q9R0S3 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Mmp17Q9R0S3 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Mmp17Q9R0S3 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Mmp17Q9R0S3 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Mmp17Q9R0S3 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Mmp17Q9R0S3 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Mmp17Q9R0S3 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Mmp17Q9R0S3 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Mmp17Q9R0S3 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Mmp17Q9R0S3 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Mmp17Q9R0S3 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Mmp17Q9R0S3 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
Mmp17Q9R0S3 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Mmp17Q9R0S3 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC16.03■□□□□ 0.16
Mmp17Q9R0S3 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16.03■□□□□ 0.16
Mmp17Q9R0S3 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.03■□□□□ 0.16
Mmp17Q9R0S3 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Mmp17Q9R0S3 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Mmp17Q9R0S3 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Mmp17Q9R0S3 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Mmp17Q9R0S3 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Mmp17Q9R0S3 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Mmp17Q9R0S3 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC16.03■□□□□ 0.16
Mmp17Q9R0S3 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Mmp17Q9R0S3 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Mmp17Q9R0S3 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Mmp17Q9R0S3 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Mmp17Q9R0S3 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Mmp17Q9R0S3 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Mmp17Q9R0S3 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Mmp17Q9R0S3 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Mmp17Q9R0S3 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Mmp17Q9R0S3 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Mmp17Q9R0S3 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Mmp17Q9R0S3 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Mmp17Q9R0S3 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Mmp17Q9R0S3 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Mmp17Q9R0S3 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Mmp17Q9R0S3 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Mmp17Q9R0S3 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
Mmp17Q9R0S3 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Mmp17Q9R0S3 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Mmp17Q9R0S3 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Mmp17Q9R0S3 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Mmp17Q9R0S3 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Mmp17Q9R0S3 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Mmp17Q9R0S3 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Mmp17Q9R0S3 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Mmp17Q9R0S3 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.01■□□□□ 0.15
Mmp17Q9R0S3 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Mmp17Q9R0S3 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Mmp17Q9R0S3 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Mmp17Q9R0S3 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Mmp17Q9R0S3 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Mmp17Q9R0S3 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Mmp17Q9R0S3 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Mmp17Q9R0S3 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Mmp17Q9R0S3 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Mmp17Q9R0S3 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Mmp17Q9R0S3 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Mmp17Q9R0S3 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Mmp17Q9R0S3 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16■□□□□ 0.15
Mmp17Q9R0S3 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Mmp17Q9R0S3 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16■□□□□ 0.15
Mmp17Q9R0S3 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16■□□□□ 0.15
Mmp17Q9R0S3 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Mmp17Q9R0S3 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16■□□□□ 0.15
Mmp17Q9R0S3 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Mmp17Q9R0S3 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC16■□□□□ 0.15
Mmp17Q9R0S3 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms