Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Scn5aQ9JJV9 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Scn5aQ9JJV9 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scn5aQ9JJV9 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Scn5aQ9JJV9 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Scn5aQ9JJV9 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.88■□□□□ 0.45
Scn5aQ9JJV9 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Scn5aQ9JJV9 Birc2-201ENSMUST00000054878 378 ntBASIC17.88■□□□□ 0.45
Scn5aQ9JJV9 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scn5aQ9JJV9 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.88■□□□□ 0.45
Scn5aQ9JJV9 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Scn5aQ9JJV9 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scn5aQ9JJV9 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scn5aQ9JJV9 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scn5aQ9JJV9 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scn5aQ9JJV9 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.88■□□□□ 0.45
Scn5aQ9JJV9 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.88■□□□□ 0.45
Scn5aQ9JJV9 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC17.88■□□□□ 0.45
Scn5aQ9JJV9 AC124569.2-201ENSMUST00000225998 818 ntBASIC17.88■□□□□ 0.45
Scn5aQ9JJV9 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Scn5aQ9JJV9 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Scn5aQ9JJV9 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scn5aQ9JJV9 Phf7-203ENSMUST00000226565 1971 ntBASIC17.87■□□□□ 0.45
Scn5aQ9JJV9 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Scn5aQ9JJV9 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scn5aQ9JJV9 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scn5aQ9JJV9 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scn5aQ9JJV9 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.87■□□□□ 0.45
Scn5aQ9JJV9 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.87■□□□□ 0.45
Scn5aQ9JJV9 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scn5aQ9JJV9 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.87■□□□□ 0.45
Scn5aQ9JJV9 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.87■□□□□ 0.45
Scn5aQ9JJV9 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scn5aQ9JJV9 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scn5aQ9JJV9 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scn5aQ9JJV9 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scn5aQ9JJV9 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Scn5aQ9JJV9 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Scn5aQ9JJV9 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scn5aQ9JJV9 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Scn5aQ9JJV9 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scn5aQ9JJV9 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Scn5aQ9JJV9 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scn5aQ9JJV9 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scn5aQ9JJV9 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scn5aQ9JJV9 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scn5aQ9JJV9 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Scn5aQ9JJV9 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scn5aQ9JJV9 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scn5aQ9JJV9 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scn5aQ9JJV9 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Scn5aQ9JJV9 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scn5aQ9JJV9 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scn5aQ9JJV9 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Scn5aQ9JJV9 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scn5aQ9JJV9 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scn5aQ9JJV9 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.86■□□□□ 0.45
Scn5aQ9JJV9 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.86■□□□□ 0.45
Scn5aQ9JJV9 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scn5aQ9JJV9 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scn5aQ9JJV9 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scn5aQ9JJV9 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Scn5aQ9JJV9 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.85■□□□□ 0.45
Scn5aQ9JJV9 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC17.85■□□□□ 0.45
Scn5aQ9JJV9 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scn5aQ9JJV9 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scn5aQ9JJV9 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scn5aQ9JJV9 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scn5aQ9JJV9 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scn5aQ9JJV9 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Scn5aQ9JJV9 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Scn5aQ9JJV9 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Scn5aQ9JJV9 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scn5aQ9JJV9 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Scn5aQ9JJV9 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Scn5aQ9JJV9 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scn5aQ9JJV9 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scn5aQ9JJV9 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scn5aQ9JJV9 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Scn5aQ9JJV9 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Scn5aQ9JJV9 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Scn5aQ9JJV9 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Scn5aQ9JJV9 Gm18421-201ENSMUST00000204122 625 ntBASIC17.84■□□□□ 0.45
Scn5aQ9JJV9 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC17.84■□□□□ 0.45
Scn5aQ9JJV9 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scn5aQ9JJV9 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Scn5aQ9JJV9 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scn5aQ9JJV9 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Scn5aQ9JJV9 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Scn5aQ9JJV9 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Scn5aQ9JJV9 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC17.83■□□□□ 0.45
Scn5aQ9JJV9 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC17.83■□□□□ 0.45
Scn5aQ9JJV9 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Scn5aQ9JJV9 Gm27000-201ENSMUST00000182943 842 ntBASIC17.83■□□□□ 0.45
Scn5aQ9JJV9 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Scn5aQ9JJV9 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scn5aQ9JJV9 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scn5aQ9JJV9 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scn5aQ9JJV9 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scn5aQ9JJV9 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms