Protein–RNA interactions for Protein: Q9D5J6

Shpk, Sedoheptulokinase, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShpkQ9D5J6 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ShpkQ9D5J6 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ShpkQ9D5J6 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ShpkQ9D5J6 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ShpkQ9D5J6 Gm27801-201ENSMUST00000184174 223 ntBASIC14.51□□□□□ -0.09
ShpkQ9D5J6 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC14.51□□□□□ -0.09
ShpkQ9D5J6 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
ShpkQ9D5J6 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
ShpkQ9D5J6 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ShpkQ9D5J6 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ShpkQ9D5J6 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
ShpkQ9D5J6 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ShpkQ9D5J6 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ShpkQ9D5J6 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ShpkQ9D5J6 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
ShpkQ9D5J6 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ShpkQ9D5J6 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
ShpkQ9D5J6 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
ShpkQ9D5J6 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
ShpkQ9D5J6 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ShpkQ9D5J6 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ShpkQ9D5J6 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
ShpkQ9D5J6 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
ShpkQ9D5J6 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ShpkQ9D5J6 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ShpkQ9D5J6 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ShpkQ9D5J6 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ShpkQ9D5J6 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
ShpkQ9D5J6 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ShpkQ9D5J6 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ShpkQ9D5J6 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
ShpkQ9D5J6 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
ShpkQ9D5J6 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ShpkQ9D5J6 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ShpkQ9D5J6 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
ShpkQ9D5J6 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ShpkQ9D5J6 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
ShpkQ9D5J6 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
ShpkQ9D5J6 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ShpkQ9D5J6 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ShpkQ9D5J6 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
ShpkQ9D5J6 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
ShpkQ9D5J6 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ShpkQ9D5J6 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ShpkQ9D5J6 AC125311.2-201ENSMUST00000227477 1940 ntBASIC14.49□□□□□ -0.09
ShpkQ9D5J6 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ShpkQ9D5J6 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ShpkQ9D5J6 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
ShpkQ9D5J6 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
ShpkQ9D5J6 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC14.49□□□□□ -0.09
ShpkQ9D5J6 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC14.49□□□□□ -0.09
ShpkQ9D5J6 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ShpkQ9D5J6 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ShpkQ9D5J6 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
ShpkQ9D5J6 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ShpkQ9D5J6 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
ShpkQ9D5J6 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ShpkQ9D5J6 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
ShpkQ9D5J6 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ShpkQ9D5J6 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ShpkQ9D5J6 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ShpkQ9D5J6 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
ShpkQ9D5J6 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
ShpkQ9D5J6 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ShpkQ9D5J6 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
ShpkQ9D5J6 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ShpkQ9D5J6 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ShpkQ9D5J6 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ShpkQ9D5J6 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ShpkQ9D5J6 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ShpkQ9D5J6 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
ShpkQ9D5J6 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ShpkQ9D5J6 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ShpkQ9D5J6 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ShpkQ9D5J6 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ShpkQ9D5J6 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
ShpkQ9D5J6 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ShpkQ9D5J6 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ShpkQ9D5J6 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ShpkQ9D5J6 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ShpkQ9D5J6 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ShpkQ9D5J6 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ShpkQ9D5J6 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ShpkQ9D5J6 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ShpkQ9D5J6 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ShpkQ9D5J6 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
ShpkQ9D5J6 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ShpkQ9D5J6 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ShpkQ9D5J6 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ShpkQ9D5J6 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC14.47□□□□□ -0.09
ShpkQ9D5J6 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ShpkQ9D5J6 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ShpkQ9D5J6 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ShpkQ9D5J6 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ShpkQ9D5J6 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC14.47□□□□□ -0.09
ShpkQ9D5J6 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.47□□□□□ -0.09
ShpkQ9D5J6 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC14.47□□□□□ -0.09
ShpkQ9D5J6 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ShpkQ9D5J6 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ShpkQ9D5J6 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms