Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh18Q8VHR0 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Pcdh18Q8VHR0 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
Pcdh18Q8VHR0 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.7■□□□□ 0.26
Pcdh18Q8VHR0 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.7■□□□□ 0.26
Pcdh18Q8VHR0 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh18Q8VHR0 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh18Q8VHR0 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh18Q8VHR0 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh18Q8VHR0 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh18Q8VHR0 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh18Q8VHR0 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh18Q8VHR0 Gm8495-201ENSMUST00000188740 694 ntBASIC16.69■□□□□ 0.26
Pcdh18Q8VHR0 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC16.69■□□□□ 0.26
Pcdh18Q8VHR0 AV356131-201ENSMUST00000206201 750 ntBASIC16.69■□□□□ 0.26
Pcdh18Q8VHR0 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh18Q8VHR0 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh18Q8VHR0 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh18Q8VHR0 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.69■□□□□ 0.26
Pcdh18Q8VHR0 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh18Q8VHR0 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh18Q8VHR0 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.69■□□□□ 0.26
Pcdh18Q8VHR0 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh18Q8VHR0 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh18Q8VHR0 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh18Q8VHR0 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh18Q8VHR0 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Pcdh18Q8VHR0 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh18Q8VHR0 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh18Q8VHR0 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh18Q8VHR0 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh18Q8VHR0 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Pcdh18Q8VHR0 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh18Q8VHR0 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh18Q8VHR0 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC16.68■□□□□ 0.26
Pcdh18Q8VHR0 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
Pcdh18Q8VHR0 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Pcdh18Q8VHR0 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh18Q8VHR0 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Pcdh18Q8VHR0 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Pcdh18Q8VHR0 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh18Q8VHR0 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh18Q8VHR0 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh18Q8VHR0 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh18Q8VHR0 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC16.67■□□□□ 0.26
Pcdh18Q8VHR0 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh18Q8VHR0 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16.67■□□□□ 0.26
Pcdh18Q8VHR0 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC16.67■□□□□ 0.26
Pcdh18Q8VHR0 Gm22325-201ENSMUST00000158904 308 ntBASIC16.67■□□□□ 0.26
Pcdh18Q8VHR0 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.67■□□□□ 0.26
Pcdh18Q8VHR0 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC16.67■□□□□ 0.26
Pcdh18Q8VHR0 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh18Q8VHR0 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh18Q8VHR0 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh18Q8VHR0 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
Pcdh18Q8VHR0 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh18Q8VHR0 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Pcdh18Q8VHR0 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh18Q8VHR0 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh18Q8VHR0 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh18Q8VHR0 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh18Q8VHR0 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.66■□□□□ 0.26
Pcdh18Q8VHR0 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Pcdh18Q8VHR0 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh18Q8VHR0 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Pcdh18Q8VHR0 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.66■□□□□ 0.26
Pcdh18Q8VHR0 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.66■□□□□ 0.26
Pcdh18Q8VHR0 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC16.66■□□□□ 0.26
Pcdh18Q8VHR0 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC16.66■□□□□ 0.26
Pcdh18Q8VHR0 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh18Q8VHR0 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Pcdh18Q8VHR0 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh18Q8VHR0 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh18Q8VHR0 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Pcdh18Q8VHR0 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.66■□□□□ 0.26
Pcdh18Q8VHR0 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh18Q8VHR0 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh18Q8VHR0 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh18Q8VHR0 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh18Q8VHR0 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh18Q8VHR0 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh18Q8VHR0 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh18Q8VHR0 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh18Q8VHR0 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Pcdh18Q8VHR0 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Pcdh18Q8VHR0 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.65■□□□□ 0.26
Pcdh18Q8VHR0 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh18Q8VHR0 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh18Q8VHR0 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh18Q8VHR0 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh18Q8VHR0 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh18Q8VHR0 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh18Q8VHR0 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh18Q8VHR0 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh18Q8VHR0 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Pcdh18Q8VHR0 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
Pcdh18Q8VHR0 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdh18Q8VHR0 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdh18Q8VHR0 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdh18Q8VHR0 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms