Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Lysmd4Q8CC84 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
Lysmd4Q8CC84 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lysmd4Q8CC84 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Lysmd4Q8CC84 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Lysmd4Q8CC84 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lysmd4Q8CC84 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lysmd4Q8CC84 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Lysmd4Q8CC84 Tfap2a-209ENSMUST00000225180 1828 ntBASIC15.54■□□□□ 0.08
Lysmd4Q8CC84 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lysmd4Q8CC84 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lysmd4Q8CC84 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lysmd4Q8CC84 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lysmd4Q8CC84 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lysmd4Q8CC84 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.54■□□□□ 0.08
Lysmd4Q8CC84 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lysmd4Q8CC84 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Lysmd4Q8CC84 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Lysmd4Q8CC84 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Lysmd4Q8CC84 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lysmd4Q8CC84 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lysmd4Q8CC84 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Lysmd4Q8CC84 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lysmd4Q8CC84 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Lysmd4Q8CC84 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lysmd4Q8CC84 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lysmd4Q8CC84 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lysmd4Q8CC84 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC15.53■□□□□ 0.08
Lysmd4Q8CC84 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lysmd4Q8CC84 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC15.53■□□□□ 0.08
Lysmd4Q8CC84 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC15.53■□□□□ 0.08
Lysmd4Q8CC84 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC15.53■□□□□ 0.08
Lysmd4Q8CC84 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Lysmd4Q8CC84 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Lysmd4Q8CC84 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lysmd4Q8CC84 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Lysmd4Q8CC84 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lysmd4Q8CC84 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lysmd4Q8CC84 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lysmd4Q8CC84 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Lysmd4Q8CC84 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lysmd4Q8CC84 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lysmd4Q8CC84 Dancr-204ENSMUST00000132389 2347 ntBASIC15.52■□□□□ 0.08
Lysmd4Q8CC84 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
Lysmd4Q8CC84 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lysmd4Q8CC84 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lysmd4Q8CC84 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lysmd4Q8CC84 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lysmd4Q8CC84 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lysmd4Q8CC84 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
Lysmd4Q8CC84 Gm2399-201ENSMUST00000104944 225 ntBASIC15.52■□□□□ 0.08
Lysmd4Q8CC84 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Lysmd4Q8CC84 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Lysmd4Q8CC84 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Lysmd4Q8CC84 Wnt10b-205ENSMUST00000226846 1204 ntBASIC15.52■□□□□ 0.08
Lysmd4Q8CC84 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Lysmd4Q8CC84 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Lysmd4Q8CC84 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Lysmd4Q8CC84 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Lysmd4Q8CC84 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Lysmd4Q8CC84 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Lysmd4Q8CC84 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Lysmd4Q8CC84 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Lysmd4Q8CC84 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lysmd4Q8CC84 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lysmd4Q8CC84 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lysmd4Q8CC84 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Lysmd4Q8CC84 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC15.51■□□□□ 0.07
Lysmd4Q8CC84 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lysmd4Q8CC84 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lysmd4Q8CC84 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC15.51■□□□□ 0.07
Lysmd4Q8CC84 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC15.51■□□□□ 0.07
Lysmd4Q8CC84 Gm10033-202ENSMUST00000211874 928 ntBASIC15.51■□□□□ 0.07
Lysmd4Q8CC84 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Lysmd4Q8CC84 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lysmd4Q8CC84 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lysmd4Q8CC84 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lysmd4Q8CC84 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lysmd4Q8CC84 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lysmd4Q8CC84 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lysmd4Q8CC84 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Lysmd4Q8CC84 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Lysmd4Q8CC84 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Lysmd4Q8CC84 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lysmd4Q8CC84 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lysmd4Q8CC84 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Lysmd4Q8CC84 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Lysmd4Q8CC84 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC15.5■□□□□ 0.07
Lysmd4Q8CC84 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Lysmd4Q8CC84 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Lysmd4Q8CC84 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Lysmd4Q8CC84 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Lysmd4Q8CC84 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Lysmd4Q8CC84 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC15.5■□□□□ 0.07
Lysmd4Q8CC84 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC15.5■□□□□ 0.07
Lysmd4Q8CC84 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC15.5■□□□□ 0.07
Lysmd4Q8CC84 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC15.5■□□□□ 0.07
Lysmd4Q8CC84 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC15.5■□□□□ 0.07
Lysmd4Q8CC84 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC15.5■□□□□ 0.07
Lysmd4Q8CC84 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms