Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tsen54Q8C2A2 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tsen54Q8C2A2 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
Tsen54Q8C2A2 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Tsen54Q8C2A2 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tsen54Q8C2A2 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tsen54Q8C2A2 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tsen54Q8C2A2 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Tsen54Q8C2A2 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tsen54Q8C2A2 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tsen54Q8C2A2 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Tsen54Q8C2A2 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tsen54Q8C2A2 Gm13146-201ENSMUST00000118508 780 ntBASIC14.5□□□□□ -0.09
Tsen54Q8C2A2 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC14.5□□□□□ -0.09
Tsen54Q8C2A2 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Tsen54Q8C2A2 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tsen54Q8C2A2 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Tsen54Q8C2A2 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tsen54Q8C2A2 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC14.5□□□□□ -0.09
Tsen54Q8C2A2 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tsen54Q8C2A2 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC14.49□□□□□ -0.09
Tsen54Q8C2A2 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Tsen54Q8C2A2 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Tsen54Q8C2A2 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Tsen54Q8C2A2 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tsen54Q8C2A2 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC14.49□□□□□ -0.09
Tsen54Q8C2A2 Gm27405-201ENSMUST00000184201 112 ntBASIC14.49□□□□□ -0.09
Tsen54Q8C2A2 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC14.49□□□□□ -0.09
Tsen54Q8C2A2 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC14.49□□□□□ -0.09
Tsen54Q8C2A2 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC14.49□□□□□ -0.09
Tsen54Q8C2A2 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tsen54Q8C2A2 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Tsen54Q8C2A2 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tsen54Q8C2A2 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tsen54Q8C2A2 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tsen54Q8C2A2 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.49□□□□□ -0.09
Tsen54Q8C2A2 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tsen54Q8C2A2 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tsen54Q8C2A2 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tsen54Q8C2A2 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tsen54Q8C2A2 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tsen54Q8C2A2 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Tsen54Q8C2A2 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Tsen54Q8C2A2 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Tsen54Q8C2A2 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
Tsen54Q8C2A2 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Tsen54Q8C2A2 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tsen54Q8C2A2 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tsen54Q8C2A2 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tsen54Q8C2A2 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tsen54Q8C2A2 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tsen54Q8C2A2 Gm13216-201ENSMUST00000117145 591 ntBASIC14.48□□□□□ -0.09
Tsen54Q8C2A2 CT010467.1-202ENSMUST00000205406 714 ntBASIC14.48□□□□□ -0.09
Tsen54Q8C2A2 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tsen54Q8C2A2 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tsen54Q8C2A2 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC14.48□□□□□ -0.09
Tsen54Q8C2A2 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tsen54Q8C2A2 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tsen54Q8C2A2 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tsen54Q8C2A2 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Tsen54Q8C2A2 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Tsen54Q8C2A2 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tsen54Q8C2A2 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tsen54Q8C2A2 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Tsen54Q8C2A2 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Tsen54Q8C2A2 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Tsen54Q8C2A2 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Tsen54Q8C2A2 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tsen54Q8C2A2 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tsen54Q8C2A2 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Tsen54Q8C2A2 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tsen54Q8C2A2 AC069562.2-201ENSMUST00000224644 2146 ntBASIC14.47□□□□□ -0.09
Tsen54Q8C2A2 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tsen54Q8C2A2 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC14.47□□□□□ -0.09
Tsen54Q8C2A2 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tsen54Q8C2A2 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.47□□□□□ -0.09
Tsen54Q8C2A2 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tsen54Q8C2A2 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Tsen54Q8C2A2 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tsen54Q8C2A2 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Tsen54Q8C2A2 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Tsen54Q8C2A2 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Tsen54Q8C2A2 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Tsen54Q8C2A2 Gm7291-201ENSMUST00000199147 382 ntBASIC14.47□□□□□ -0.09
Tsen54Q8C2A2 Slc35b2-207ENSMUST00000226086 850 ntBASIC14.47□□□□□ -0.09
Tsen54Q8C2A2 Gm37374-201ENSMUST00000194954 1829 ntBASIC14.47□□□□□ -0.09
Tsen54Q8C2A2 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tsen54Q8C2A2 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tsen54Q8C2A2 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Tsen54Q8C2A2 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC14.47□□□□□ -0.09
Tsen54Q8C2A2 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tsen54Q8C2A2 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tsen54Q8C2A2 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tsen54Q8C2A2 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tsen54Q8C2A2 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC14.46□□□□□ -0.09
Tsen54Q8C2A2 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tsen54Q8C2A2 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tsen54Q8C2A2 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tsen54Q8C2A2 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Tsen54Q8C2A2 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms