Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.81■□□□□ 0.28
Cpsf4Q8BQZ5 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC16.81■□□□□ 0.28
Cpsf4Q8BQZ5 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cpsf4Q8BQZ5 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Cpsf4Q8BQZ5 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cpsf4Q8BQZ5 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.81■□□□□ 0.28
Cpsf4Q8BQZ5 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cpsf4Q8BQZ5 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cpsf4Q8BQZ5 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cpsf4Q8BQZ5 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cpsf4Q8BQZ5 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cpsf4Q8BQZ5 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cpsf4Q8BQZ5 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.8■□□□□ 0.28
Cpsf4Q8BQZ5 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cpsf4Q8BQZ5 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cpsf4Q8BQZ5 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cpsf4Q8BQZ5 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.8■□□□□ 0.28
Cpsf4Q8BQZ5 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cpsf4Q8BQZ5 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cpsf4Q8BQZ5 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.8■□□□□ 0.28
Cpsf4Q8BQZ5 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cpsf4Q8BQZ5 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cpsf4Q8BQZ5 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cpsf4Q8BQZ5 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Cpsf4Q8BQZ5 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cpsf4Q8BQZ5 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cpsf4Q8BQZ5 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cpsf4Q8BQZ5 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cpsf4Q8BQZ5 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cpsf4Q8BQZ5 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cpsf4Q8BQZ5 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cpsf4Q8BQZ5 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cpsf4Q8BQZ5 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cpsf4Q8BQZ5 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cpsf4Q8BQZ5 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cpsf4Q8BQZ5 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cpsf4Q8BQZ5 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cpsf4Q8BQZ5 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cpsf4Q8BQZ5 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Cpsf4Q8BQZ5 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cpsf4Q8BQZ5 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.79■□□□□ 0.28
Cpsf4Q8BQZ5 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Cpsf4Q8BQZ5 Gm13181-201ENSMUST00000120117 1069 ntBASIC16.79■□□□□ 0.28
Cpsf4Q8BQZ5 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cpsf4Q8BQZ5 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cpsf4Q8BQZ5 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cpsf4Q8BQZ5 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cpsf4Q8BQZ5 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cpsf4Q8BQZ5 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cpsf4Q8BQZ5 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.78■□□□□ 0.28
Cpsf4Q8BQZ5 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC16.78■□□□□ 0.28
Cpsf4Q8BQZ5 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Cpsf4Q8BQZ5 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.78■□□□□ 0.28
Cpsf4Q8BQZ5 Gm10252-201ENSMUST00000209541 832 ntBASIC16.78■□□□□ 0.28
Cpsf4Q8BQZ5 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cpsf4Q8BQZ5 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cpsf4Q8BQZ5 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.78■□□□□ 0.28
Cpsf4Q8BQZ5 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Cpsf4Q8BQZ5 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cpsf4Q8BQZ5 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cpsf4Q8BQZ5 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cpsf4Q8BQZ5 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cpsf4Q8BQZ5 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cpsf4Q8BQZ5 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cpsf4Q8BQZ5 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cpsf4Q8BQZ5 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cpsf4Q8BQZ5 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cpsf4Q8BQZ5 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.77■□□□□ 0.28
Cpsf4Q8BQZ5 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cpsf4Q8BQZ5 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.77■□□□□ 0.28
Cpsf4Q8BQZ5 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cpsf4Q8BQZ5 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.77■□□□□ 0.28
Cpsf4Q8BQZ5 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cpsf4Q8BQZ5 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.77■□□□□ 0.28
Cpsf4Q8BQZ5 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cpsf4Q8BQZ5 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cpsf4Q8BQZ5 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cpsf4Q8BQZ5 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cpsf4Q8BQZ5 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cpsf4Q8BQZ5 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cpsf4Q8BQZ5 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cpsf4Q8BQZ5 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.27
Cpsf4Q8BQZ5 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cpsf4Q8BQZ5 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cpsf4Q8BQZ5 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cpsf4Q8BQZ5 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Cpsf4Q8BQZ5 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.27
Cpsf4Q8BQZ5 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cpsf4Q8BQZ5 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC16.77■□□□□ 0.27
Cpsf4Q8BQZ5 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cpsf4Q8BQZ5 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cpsf4Q8BQZ5 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cpsf4Q8BQZ5 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Cpsf4Q8BQZ5 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cpsf4Q8BQZ5 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cpsf4Q8BQZ5 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cpsf4Q8BQZ5 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cpsf4Q8BQZ5 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC16.76■□□□□ 0.27
Cpsf4Q8BQZ5 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC16.76■□□□□ 0.27
Cpsf4Q8BQZ5 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms