Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Depdc1bQ8BH88 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.83■□□□□ 0.6
Depdc1bQ8BH88 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Depdc1bQ8BH88 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Depdc1bQ8BH88 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Depdc1bQ8BH88 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Depdc1bQ8BH88 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Depdc1bQ8BH88 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Depdc1bQ8BH88 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Depdc1bQ8BH88 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Depdc1bQ8BH88 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Depdc1bQ8BH88 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Depdc1bQ8BH88 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Depdc1bQ8BH88 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Depdc1bQ8BH88 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.82■□□□□ 0.6
Depdc1bQ8BH88 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.82■□□□□ 0.6
Depdc1bQ8BH88 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
Depdc1bQ8BH88 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.82■□□□□ 0.6
Depdc1bQ8BH88 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Depdc1bQ8BH88 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Depdc1bQ8BH88 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Depdc1bQ8BH88 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Depdc1bQ8BH88 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Depdc1bQ8BH88 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Depdc1bQ8BH88 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Depdc1bQ8BH88 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Depdc1bQ8BH88 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Depdc1bQ8BH88 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Depdc1bQ8BH88 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Depdc1bQ8BH88 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Depdc1bQ8BH88 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Depdc1bQ8BH88 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Depdc1bQ8BH88 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Depdc1bQ8BH88 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.81■□□□□ 0.6
Depdc1bQ8BH88 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Depdc1bQ8BH88 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Depdc1bQ8BH88 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Depdc1bQ8BH88 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Depdc1bQ8BH88 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Depdc1bQ8BH88 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC18.81■□□□□ 0.6
Depdc1bQ8BH88 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Depdc1bQ8BH88 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Depdc1bQ8BH88 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Depdc1bQ8BH88 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Depdc1bQ8BH88 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Depdc1bQ8BH88 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.8■□□□□ 0.6
Depdc1bQ8BH88 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.8■□□□□ 0.6
Depdc1bQ8BH88 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Depdc1bQ8BH88 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Depdc1bQ8BH88 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Depdc1bQ8BH88 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Depdc1bQ8BH88 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Depdc1bQ8BH88 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Depdc1bQ8BH88 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Depdc1bQ8BH88 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Depdc1bQ8BH88 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Depdc1bQ8BH88 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Depdc1bQ8BH88 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Depdc1bQ8BH88 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Depdc1bQ8BH88 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Depdc1bQ8BH88 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Depdc1bQ8BH88 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Depdc1bQ8BH88 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Depdc1bQ8BH88 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.79■□□□□ 0.6
Depdc1bQ8BH88 Gm37055-201ENSMUST00000191866 133 ntBASIC18.79■□□□□ 0.6
Depdc1bQ8BH88 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Depdc1bQ8BH88 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Depdc1bQ8BH88 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Depdc1bQ8BH88 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Depdc1bQ8BH88 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Depdc1bQ8BH88 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Depdc1bQ8BH88 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.79■□□□□ 0.6
Depdc1bQ8BH88 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.78■□□□□ 0.6
Depdc1bQ8BH88 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Depdc1bQ8BH88 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Depdc1bQ8BH88 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Depdc1bQ8BH88 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Depdc1bQ8BH88 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Depdc1bQ8BH88 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Depdc1bQ8BH88 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Depdc1bQ8BH88 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Depdc1bQ8BH88 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Depdc1bQ8BH88 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Depdc1bQ8BH88 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Depdc1bQ8BH88 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Depdc1bQ8BH88 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Depdc1bQ8BH88 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Depdc1bQ8BH88 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Depdc1bQ8BH88 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Depdc1bQ8BH88 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Depdc1bQ8BH88 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Depdc1bQ8BH88 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
Depdc1bQ8BH88 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Depdc1bQ8BH88 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Depdc1bQ8BH88 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Depdc1bQ8BH88 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Depdc1bQ8BH88 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.77■□□□□ 0.6
Depdc1bQ8BH88 Gm15375-201ENSMUST00000119510 849 ntBASIC18.77■□□□□ 0.6
Depdc1bQ8BH88 Gm13836-201ENSMUST00000121159 501 ntBASIC18.77■□□□□ 0.6
Depdc1bQ8BH88 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms