Protein–RNA interactions for Protein: Q6NS45

Ccdc66, Coiled-coil domain-containing protein 66, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc66Q6NS45 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Ccdc66Q6NS45 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc66Q6NS45 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc66Q6NS45 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc66Q6NS45 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc66Q6NS45 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc66Q6NS45 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Ccdc66Q6NS45 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc66Q6NS45 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc66Q6NS45 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc66Q6NS45 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc66Q6NS45 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc66Q6NS45 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc66Q6NS45 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC20.06■□□□□ 0.8
Ccdc66Q6NS45 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Ccdc66Q6NS45 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc66Q6NS45 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc66Q6NS45 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Ccdc66Q6NS45 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc66Q6NS45 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Ccdc66Q6NS45 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc66Q6NS45 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc66Q6NS45 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc66Q6NS45 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc66Q6NS45 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc66Q6NS45 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.05■□□□□ 0.8
Ccdc66Q6NS45 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc66Q6NS45 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc66Q6NS45 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc66Q6NS45 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc66Q6NS45 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Ccdc66Q6NS45 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Ccdc66Q6NS45 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc66Q6NS45 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc66Q6NS45 Gm45774-201ENSMUST00000211992 2665 ntBASIC20.04■□□□□ 0.8
Ccdc66Q6NS45 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc66Q6NS45 Dio3-201ENSMUST00000097228 1449 ntBASIC20.04■□□□□ 0.8
Ccdc66Q6NS45 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc66Q6NS45 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc66Q6NS45 Mir6349-201ENSMUST00000184059 97 ntBASIC20.04■□□□□ 0.8
Ccdc66Q6NS45 Gm10138-203ENSMUST00000206952 366 ntBASIC20.04■□□□□ 0.8
Ccdc66Q6NS45 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Ccdc66Q6NS45 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc66Q6NS45 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc66Q6NS45 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc66Q6NS45 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC20.04■□□□□ 0.8
Ccdc66Q6NS45 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC20.04■□□□□ 0.8
Ccdc66Q6NS45 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc66Q6NS45 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc66Q6NS45 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc66Q6NS45 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc66Q6NS45 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Ccdc66Q6NS45 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC20.03■□□□□ 0.8
Ccdc66Q6NS45 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC20.03■□□□□ 0.8
Ccdc66Q6NS45 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc66Q6NS45 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc66Q6NS45 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
Ccdc66Q6NS45 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc66Q6NS45 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc66Q6NS45 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Ccdc66Q6NS45 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Ccdc66Q6NS45 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc66Q6NS45 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc66Q6NS45 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc66Q6NS45 Gm15375-201ENSMUST00000119510 849 ntBASIC20.02■□□□□ 0.8
Ccdc66Q6NS45 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC20.02■□□□□ 0.8
Ccdc66Q6NS45 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc66Q6NS45 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.02■□□□□ 0.8
Ccdc66Q6NS45 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc66Q6NS45 Gm45560-201ENSMUST00000211492 1472 ntBASIC20.02■□□□□ 0.8
Ccdc66Q6NS45 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Ccdc66Q6NS45 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc66Q6NS45 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC20.02■□□□□ 0.79
Ccdc66Q6NS45 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ccdc66Q6NS45 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ccdc66Q6NS45 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ccdc66Q6NS45 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
Ccdc66Q6NS45 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC20.02■□□□□ 0.79
Ccdc66Q6NS45 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc66Q6NS45 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc66Q6NS45 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc66Q6NS45 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc66Q6NS45 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
Ccdc66Q6NS45 Gm12896-201ENSMUST00000118430 226 ntBASIC20.01■□□□□ 0.79
Ccdc66Q6NS45 Gm11643-201ENSMUST00000119578 864 ntBASIC20.01■□□□□ 0.79
Ccdc66Q6NS45 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.01■□□□□ 0.79
Ccdc66Q6NS45 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc66Q6NS45 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.01■□□□□ 0.79
Ccdc66Q6NS45 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Ccdc66Q6NS45 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc66Q6NS45 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc66Q6NS45 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc66Q6NS45 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ccdc66Q6NS45 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc66Q6NS45 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC20■□□□□ 0.79
Ccdc66Q6NS45 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC20■□□□□ 0.79
Ccdc66Q6NS45 Gm16401-202ENSMUST00000197463 2074 ntBASIC20■□□□□ 0.79
Ccdc66Q6NS45 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC20■□□□□ 0.79
Ccdc66Q6NS45 Alkbh1-212ENSMUST00000185301 408 ntBASIC20■□□□□ 0.79
Ccdc66Q6NS45 Gm3807-201ENSMUST00000193520 1168 ntBASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms