Protein–RNA interactions for Protein: Q60855

Ripk1, Receptor-interacting serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk1Q60855 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ripk1Q60855 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Ripk1Q60855 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.34■□□□□ 0.21
Ripk1Q60855 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ripk1Q60855 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ripk1Q60855 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.34■□□□□ 0.21
Ripk1Q60855 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC16.34■□□□□ 0.21
Ripk1Q60855 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
Ripk1Q60855 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ripk1Q60855 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Ripk1Q60855 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ripk1Q60855 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ripk1Q60855 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Ripk1Q60855 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ripk1Q60855 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ripk1Q60855 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.34■□□□□ 0.21
Ripk1Q60855 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Ripk1Q60855 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ripk1Q60855 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Ripk1Q60855 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.34■□□□□ 0.21
Ripk1Q60855 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ripk1Q60855 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.33■□□□□ 0.21
Ripk1Q60855 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ripk1Q60855 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Ripk1Q60855 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ripk1Q60855 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Ripk1Q60855 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ripk1Q60855 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ripk1Q60855 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ripk1Q60855 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16.33■□□□□ 0.2
Ripk1Q60855 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ripk1Q60855 Gm44878-201ENSMUST00000205812 1295 ntBASIC16.33■□□□□ 0.2
Ripk1Q60855 Gm18025-201ENSMUST00000221733 862 ntBASIC16.33■□□□□ 0.2
Ripk1Q60855 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.33■□□□□ 0.2
Ripk1Q60855 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ripk1Q60855 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ripk1Q60855 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ripk1Q60855 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ripk1Q60855 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ripk1Q60855 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ripk1Q60855 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ripk1Q60855 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ripk1Q60855 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ripk1Q60855 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Ripk1Q60855 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ripk1Q60855 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ripk1Q60855 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
Ripk1Q60855 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ripk1Q60855 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Ripk1Q60855 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.32■□□□□ 0.2
Ripk1Q60855 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ripk1Q60855 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ripk1Q60855 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.32■□□□□ 0.2
Ripk1Q60855 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.32■□□□□ 0.2
Ripk1Q60855 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.32■□□□□ 0.2
Ripk1Q60855 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ripk1Q60855 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ripk1Q60855 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ripk1Q60855 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ripk1Q60855 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Ripk1Q60855 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ripk1Q60855 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ripk1Q60855 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ripk1Q60855 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ripk1Q60855 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ripk1Q60855 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ripk1Q60855 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ripk1Q60855 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ripk1Q60855 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ripk1Q60855 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Ripk1Q60855 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Ripk1Q60855 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ripk1Q60855 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ripk1Q60855 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ripk1Q60855 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ripk1Q60855 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ripk1Q60855 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ripk1Q60855 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.31■□□□□ 0.2
Ripk1Q60855 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.31■□□□□ 0.2
Ripk1Q60855 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.31■□□□□ 0.2
Ripk1Q60855 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Ripk1Q60855 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ripk1Q60855 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ripk1Q60855 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ripk1Q60855 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ripk1Q60855 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.3■□□□□ 0.2
Ripk1Q60855 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ripk1Q60855 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.3■□□□□ 0.2
Ripk1Q60855 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ripk1Q60855 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ripk1Q60855 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ripk1Q60855 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ripk1Q60855 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ripk1Q60855 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ripk1Q60855 Gm6576-201ENSMUST00000169678 883 ntBASIC16.3■□□□□ 0.2
Ripk1Q60855 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.3■□□□□ 0.2
Ripk1Q60855 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ripk1Q60855 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.3■□□□□ 0.2
Ripk1Q60855 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ripk1Q60855 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms