Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Xcl1P47993 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Xcl1P47993 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC11.35□□□□□ -0.59
Xcl1P47993 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Xcl1P47993 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Xcl1P47993 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Xcl1P47993 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Xcl1P47993 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Xcl1P47993 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
Xcl1P47993 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Xcl1P47993 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Xcl1P47993 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Xcl1P47993 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Xcl1P47993 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Xcl1P47993 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC11.35□□□□□ -0.59
Xcl1P47993 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Xcl1P47993 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC11.35□□□□□ -0.59
Xcl1P47993 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Xcl1P47993 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Xcl1P47993 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Xcl1P47993 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Xcl1P47993 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Xcl1P47993 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Xcl1P47993 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Xcl1P47993 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Xcl1P47993 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Xcl1P47993 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC11.34□□□□□ -0.59
Xcl1P47993 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Xcl1P47993 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Xcl1P47993 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Xcl1P47993 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Xcl1P47993 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Xcl1P47993 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Xcl1P47993 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Xcl1P47993 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Xcl1P47993 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Xcl1P47993 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Xcl1P47993 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Xcl1P47993 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Xcl1P47993 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Xcl1P47993 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC11.34□□□□□ -0.59
Xcl1P47993 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Xcl1P47993 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Xcl1P47993 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Xcl1P47993 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Xcl1P47993 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Xcl1P47993 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Xcl1P47993 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Xcl1P47993 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Xcl1P47993 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Xcl1P47993 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Xcl1P47993 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Xcl1P47993 Tgds-204ENSMUST00000228543 1594 ntBASIC11.33□□□□□ -0.6
Xcl1P47993 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Xcl1P47993 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Xcl1P47993 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Xcl1P47993 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC11.33□□□□□ -0.6
Xcl1P47993 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Xcl1P47993 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Xcl1P47993 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Xcl1P47993 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Xcl1P47993 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC11.33□□□□□ -0.6
Xcl1P47993 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC11.33□□□□□ -0.6
Xcl1P47993 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Xcl1P47993 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Xcl1P47993 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC11.33□□□□□ -0.6
Xcl1P47993 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC11.33□□□□□ -0.6
Xcl1P47993 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Xcl1P47993 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Xcl1P47993 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
Xcl1P47993 Gm42911-201ENSMUST00000199360 1630 ntBASIC11.33□□□□□ -0.6
Xcl1P47993 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Xcl1P47993 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Xcl1P47993 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Xcl1P47993 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Xcl1P47993 AC121961.1-201ENSMUST00000218594 1779 ntBASIC11.33□□□□□ -0.6
Xcl1P47993 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Xcl1P47993 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Xcl1P47993 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Xcl1P47993 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Xcl1P47993 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Xcl1P47993 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Xcl1P47993 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC11.33□□□□□ -0.6
Xcl1P47993 Gm26596-201ENSMUST00000180464 2655 ntBASIC11.32□□□□□ -0.6
Xcl1P47993 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Xcl1P47993 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
Xcl1P47993 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Xcl1P47993 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Xcl1P47993 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Xcl1P47993 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Xcl1P47993 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Xcl1P47993 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Xcl1P47993 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Xcl1P47993 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Xcl1P47993 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Xcl1P47993 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Xcl1P47993 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Xcl1P47993 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Xcl1P47993 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
Xcl1P47993 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms