Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 AC132104.2-201ENSMUST00000215011 266 ntBASIC16.57■□□□□ 0.24
Sox18P43680 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Sox18P43680 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sox18P43680 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sox18P43680 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sox18P43680 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Sox18P43680 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.57■□□□□ 0.24
Sox18P43680 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sox18P43680 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sox18P43680 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sox18P43680 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Sox18P43680 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sox18P43680 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sox18P43680 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sox18P43680 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Sox18P43680 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Sox18P43680 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Sox18P43680 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Sox18P43680 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.56■□□□□ 0.24
Sox18P43680 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sox18P43680 Gm26039-201ENSMUST00000158152 144 ntBASIC16.56■□□□□ 0.24
Sox18P43680 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.56■□□□□ 0.24
Sox18P43680 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Sox18P43680 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC16.56■□□□□ 0.24
Sox18P43680 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC16.56■□□□□ 0.24
Sox18P43680 Gm45328-201ENSMUST00000210942 917 ntBASIC16.56■□□□□ 0.24
Sox18P43680 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC16.56■□□□□ 0.24
Sox18P43680 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
Sox18P43680 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sox18P43680 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sox18P43680 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sox18P43680 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Sox18P43680 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sox18P43680 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox18P43680 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.55■□□□□ 0.24
Sox18P43680 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox18P43680 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Sox18P43680 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Sox18P43680 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.55■□□□□ 0.24
Sox18P43680 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Sox18P43680 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox18P43680 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox18P43680 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox18P43680 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Sox18P43680 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Sox18P43680 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.55■□□□□ 0.24
Sox18P43680 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.55■□□□□ 0.24
Sox18P43680 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox18P43680 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox18P43680 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Sox18P43680 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox18P43680 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox18P43680 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox18P43680 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox18P43680 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox18P43680 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Sox18P43680 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox18P43680 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.54■□□□□ 0.24
Sox18P43680 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Sox18P43680 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Sox18P43680 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.54■□□□□ 0.24
Sox18P43680 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox18P43680 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Sox18P43680 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Sox18P43680 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox18P43680 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sox18P43680 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Sox18P43680 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sox18P43680 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Sox18P43680 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sox18P43680 Mir770-201ENSMUST00000103252 94 ntBASIC16.53■□□□□ 0.24
Sox18P43680 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sox18P43680 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC16.53■□□□□ 0.24
Sox18P43680 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC16.53■□□□□ 0.24
Sox18P43680 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sox18P43680 Gm5112-201ENSMUST00000204407 2368 ntBASIC16.53■□□□□ 0.24
Sox18P43680 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Sox18P43680 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Sox18P43680 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sox18P43680 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sox18P43680 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sox18P43680 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sox18P43680 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Sox18P43680 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sox18P43680 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sox18P43680 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Sox18P43680 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sox18P43680 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Sox18P43680 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Sox18P43680 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.52■□□□□ 0.24
Sox18P43680 Il3ra-202ENSMUST00000223589 738 ntBASIC16.52■□□□□ 0.24
Sox18P43680 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sox18P43680 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Sox18P43680 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC16.52■□□□□ 0.24
Sox18P43680 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sox18P43680 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sox18P43680 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sox18P43680 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sox18P43680 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sox18P43680 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms