Protein–RNA interactions for Protein: P35546

Ret, Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RetP35546 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
RetP35546 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RetP35546 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
RetP35546 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
RetP35546 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
RetP35546 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
RetP35546 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
RetP35546 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
RetP35546 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.2■□□□□ 0.18
RetP35546 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RetP35546 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RetP35546 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RetP35546 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RetP35546 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
RetP35546 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RetP35546 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.2■□□□□ 0.18
RetP35546 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
RetP35546 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RetP35546 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.2■□□□□ 0.18
RetP35546 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.2■□□□□ 0.18
RetP35546 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.2■□□□□ 0.18
RetP35546 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
RetP35546 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RetP35546 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RetP35546 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RetP35546 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RetP35546 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
RetP35546 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RetP35546 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RetP35546 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.19■□□□□ 0.18
RetP35546 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RetP35546 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RetP35546 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
RetP35546 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RetP35546 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.19■□□□□ 0.18
RetP35546 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.19■□□□□ 0.18
RetP35546 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
RetP35546 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RetP35546 Gm10138-203ENSMUST00000206952 366 ntBASIC16.19■□□□□ 0.18
RetP35546 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
RetP35546 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RetP35546 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.19■□□□□ 0.18
RetP35546 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RetP35546 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
RetP35546 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RetP35546 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RetP35546 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RetP35546 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RetP35546 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
RetP35546 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RetP35546 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RetP35546 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.18■□□□□ 0.18
RetP35546 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RetP35546 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.18■□□□□ 0.18
RetP35546 Gm13559-201ENSMUST00000120476 863 ntBASIC16.18■□□□□ 0.18
RetP35546 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.18■□□□□ 0.18
RetP35546 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
RetP35546 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RetP35546 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RetP35546 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RetP35546 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
RetP35546 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RetP35546 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RetP35546 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RetP35546 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
RetP35546 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RetP35546 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RetP35546 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RetP35546 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
RetP35546 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RetP35546 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RetP35546 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
RetP35546 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.17■□□□□ 0.18
RetP35546 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RetP35546 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.17■□□□□ 0.18
RetP35546 Gm11539-201ENSMUST00000119837 557 ntBASIC16.17■□□□□ 0.18
RetP35546 Gm13436-201ENSMUST00000120418 567 ntBASIC16.17■□□□□ 0.18
RetP35546 Gm6659-201ENSMUST00000174752 547 ntBASIC16.17■□□□□ 0.18
RetP35546 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RetP35546 Gm10459-201ENSMUST00000202708 1155 ntBASIC16.17■□□□□ 0.18
RetP35546 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.17■□□□□ 0.18
RetP35546 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RetP35546 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RetP35546 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RetP35546 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RetP35546 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RetP35546 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
RetP35546 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RetP35546 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
RetP35546 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RetP35546 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
RetP35546 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.17■□□□□ 0.18
RetP35546 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RetP35546 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RetP35546 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.17■□□□□ 0.18
RetP35546 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RetP35546 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RetP35546 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.16■□□□□ 0.18
RetP35546 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RetP35546 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms