Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cxcl1P12850 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cxcl1P12850 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Cxcl1P12850 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cxcl1P12850 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cxcl1P12850 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cxcl1P12850 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cxcl1P12850 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Cxcl1P12850 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cxcl1P12850 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Cxcl1P12850 Gm13401-201ENSMUST00000117074 291 ntBASIC14.35□□□□□ -0.11
Cxcl1P12850 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cxcl1P12850 Gm42642-201ENSMUST00000200683 355 ntBASIC14.35□□□□□ -0.11
Cxcl1P12850 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cxcl1P12850 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cxcl1P12850 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Cxcl1P12850 Flg-201ENSMUST00000050758 1488 ntBASIC14.35□□□□□ -0.11
Cxcl1P12850 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cxcl1P12850 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cxcl1P12850 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cxcl1P12850 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cxcl1P12850 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cxcl1P12850 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cxcl1P12850 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Cxcl1P12850 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.34□□□□□ -0.11
Cxcl1P12850 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cxcl1P12850 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cxcl1P12850 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Cxcl1P12850 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
Cxcl1P12850 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cxcl1P12850 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Cxcl1P12850 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cxcl1P12850 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cxcl1P12850 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Cxcl1P12850 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC14.34□□□□□ -0.11
Cxcl1P12850 AV356131-201ENSMUST00000206201 750 ntBASIC14.34□□□□□ -0.11
Cxcl1P12850 Gm44549-201ENSMUST00000208351 577 ntBASIC14.34□□□□□ -0.11
Cxcl1P12850 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Cxcl1P12850 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Cxcl1P12850 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cxcl1P12850 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cxcl1P12850 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cxcl1P12850 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cxcl1P12850 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Cxcl1P12850 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cxcl1P12850 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Cxcl1P12850 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Cxcl1P12850 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cxcl1P12850 Gm37166-201ENSMUST00000195473 2474 ntBASIC14.34□□□□□ -0.11
Cxcl1P12850 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cxcl1P12850 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cxcl1P12850 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cxcl1P12850 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Cxcl1P12850 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cxcl1P12850 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cxcl1P12850 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Cxcl1P12850 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Cxcl1P12850 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cxcl1P12850 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cxcl1P12850 Gm7290-201ENSMUST00000104990 617 ntBASIC14.33□□□□□ -0.12
Cxcl1P12850 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cxcl1P12850 Gm12918-201ENSMUST00000120234 636 ntBASIC14.33□□□□□ -0.12
Cxcl1P12850 Gm15710-201ENSMUST00000121821 636 ntBASIC14.33□□□□□ -0.12
Cxcl1P12850 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC14.33□□□□□ -0.12
Cxcl1P12850 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cxcl1P12850 Gm6211-202ENSMUST00000167849 925 ntBASIC14.33□□□□□ -0.12
Cxcl1P12850 Gm5075-201ENSMUST00000196916 622 ntBASIC14.33□□□□□ -0.12
Cxcl1P12850 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC14.33□□□□□ -0.12
Cxcl1P12850 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.12
Cxcl1P12850 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC14.33□□□□□ -0.12
Cxcl1P12850 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cxcl1P12850 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cxcl1P12850 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC14.33□□□□□ -0.12
Cxcl1P12850 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC14.33□□□□□ -0.12
Cxcl1P12850 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cxcl1P12850 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC14.33□□□□□ -0.12
Cxcl1P12850 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cxcl1P12850 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cxcl1P12850 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cxcl1P12850 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cxcl1P12850 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cxcl1P12850 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Cxcl1P12850 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cxcl1P12850 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Cxcl1P12850 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cxcl1P12850 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Cxcl1P12850 Gm11620-201ENSMUST00000118770 1845 ntBASIC14.32□□□□□ -0.12
Cxcl1P12850 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cxcl1P12850 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cxcl1P12850 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC14.32□□□□□ -0.12
Cxcl1P12850 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cxcl1P12850 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cxcl1P12850 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cxcl1P12850 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cxcl1P12850 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cxcl1P12850 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cxcl1P12850 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cxcl1P12850 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cxcl1P12850 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC14.32□□□□□ -0.12
Cxcl1P12850 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms