Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
H3f3cP02301 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H3f3cP02301 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
H3f3cP02301 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H3f3cP02301 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H3f3cP02301 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
H3f3cP02301 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
H3f3cP02301 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H3f3cP02301 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
H3f3cP02301 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
H3f3cP02301 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H3f3cP02301 Gm13401-201ENSMUST00000117074 291 ntBASIC14.85□□□□□ -0.03
H3f3cP02301 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
H3f3cP02301 AC153881.1-201ENSMUST00000214448 284 ntBASIC14.85□□□□□ -0.03
H3f3cP02301 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H3f3cP02301 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
H3f3cP02301 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC14.85□□□□□ -0.03
H3f3cP02301 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
H3f3cP02301 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H3f3cP02301 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
H3f3cP02301 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H3f3cP02301 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H3f3cP02301 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
H3f3cP02301 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
H3f3cP02301 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H3f3cP02301 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H3f3cP02301 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H3f3cP02301 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
H3f3cP02301 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H3f3cP02301 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
H3f3cP02301 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H3f3cP02301 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H3f3cP02301 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
H3f3cP02301 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H3f3cP02301 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
H3f3cP02301 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H3f3cP02301 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
H3f3cP02301 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H3f3cP02301 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
H3f3cP02301 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
H3f3cP02301 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
H3f3cP02301 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H3f3cP02301 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14.84□□□□□ -0.03
H3f3cP02301 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
H3f3cP02301 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
H3f3cP02301 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
H3f3cP02301 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
H3f3cP02301 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
H3f3cP02301 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
H3f3cP02301 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC14.83□□□□□ -0.04
H3f3cP02301 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
H3f3cP02301 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC14.83□□□□□ -0.04
H3f3cP02301 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
H3f3cP02301 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC14.83□□□□□ -0.04
H3f3cP02301 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC14.83□□□□□ -0.04
H3f3cP02301 AC175538.1-201ENSMUST00000225343 1269 ntBASIC14.83□□□□□ -0.04
H3f3cP02301 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
H3f3cP02301 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
H3f3cP02301 CT010444.2-201ENSMUST00000217877 1629 ntBASIC14.83□□□□□ -0.04
H3f3cP02301 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
H3f3cP02301 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
H3f3cP02301 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
H3f3cP02301 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
H3f3cP02301 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
H3f3cP02301 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
H3f3cP02301 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC14.83□□□□□ -0.04
H3f3cP02301 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC14.82□□□□□ -0.04
H3f3cP02301 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
H3f3cP02301 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
H3f3cP02301 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
H3f3cP02301 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
H3f3cP02301 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
H3f3cP02301 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
H3f3cP02301 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
H3f3cP02301 Mir1199-201ENSMUST00000117015 119 ntBASIC14.82□□□□□ -0.04
H3f3cP02301 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
H3f3cP02301 Mir8112-201ENSMUST00000184382 131 ntBASIC14.82□□□□□ -0.04
H3f3cP02301 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
H3f3cP02301 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
H3f3cP02301 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
H3f3cP02301 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
H3f3cP02301 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
H3f3cP02301 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
H3f3cP02301 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
H3f3cP02301 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
H3f3cP02301 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
H3f3cP02301 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
H3f3cP02301 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
H3f3cP02301 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
H3f3cP02301 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
H3f3cP02301 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
H3f3cP02301 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC14.81□□□□□ -0.04
H3f3cP02301 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
H3f3cP02301 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
H3f3cP02301 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC14.81□□□□□ -0.04
H3f3cP02301 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
H3f3cP02301 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
H3f3cP02301 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
H3f3cP02301 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC14.81□□□□□ -0.04
H3f3cP02301 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms