Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
Efnb3O35393 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Efnb3O35393 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Efnb3O35393 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Efnb3O35393 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Efnb3O35393 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Efnb3O35393 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC13.7□□□□□ -0.22
Efnb3O35393 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Efnb3O35393 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Efnb3O35393 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Efnb3O35393 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Efnb3O35393 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Efnb3O35393 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Efnb3O35393 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
Efnb3O35393 Mir8112-201ENSMUST00000184382 131 ntBASIC13.7□□□□□ -0.22
Efnb3O35393 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Efnb3O35393 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Efnb3O35393 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Efnb3O35393 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Efnb3O35393 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Efnb3O35393 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Efnb3O35393 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Efnb3O35393 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
Efnb3O35393 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Efnb3O35393 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Efnb3O35393 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Efnb3O35393 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Efnb3O35393 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Efnb3O35393 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Efnb3O35393 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Efnb3O35393 Gm37166-201ENSMUST00000195473 2474 ntBASIC13.69□□□□□ -0.22
Efnb3O35393 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Efnb3O35393 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Efnb3O35393 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC13.69□□□□□ -0.22
Efnb3O35393 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Efnb3O35393 Gm42569-201ENSMUST00000200539 472 ntBASIC13.69□□□□□ -0.22
Efnb3O35393 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC13.69□□□□□ -0.22
Efnb3O35393 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Efnb3O35393 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Efnb3O35393 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Efnb3O35393 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Efnb3O35393 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Efnb3O35393 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Efnb3O35393 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Efnb3O35393 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Efnb3O35393 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Efnb3O35393 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Efnb3O35393 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Efnb3O35393 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Efnb3O35393 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Efnb3O35393 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Efnb3O35393 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Efnb3O35393 Gm42918-201ENSMUST00000199249 1580 ntBASIC13.68□□□□□ -0.22
Efnb3O35393 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Efnb3O35393 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Efnb3O35393 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Efnb3O35393 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Efnb3O35393 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Efnb3O35393 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Efnb3O35393 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Efnb3O35393 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Efnb3O35393 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Efnb3O35393 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Efnb3O35393 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Efnb3O35393 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Efnb3O35393 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Efnb3O35393 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Efnb3O35393 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Efnb3O35393 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Efnb3O35393 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC13.67□□□□□ -0.22
Efnb3O35393 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC13.67□□□□□ -0.22
Efnb3O35393 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Efnb3O35393 Gm27405-201ENSMUST00000184201 112 ntBASIC13.67□□□□□ -0.22
Efnb3O35393 Gm6420-201ENSMUST00000193885 723 ntBASIC13.67□□□□□ -0.22
Efnb3O35393 Gm29791-202ENSMUST00000207888 369 ntBASIC13.67□□□□□ -0.22
Efnb3O35393 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC13.67□□□□□ -0.22
Efnb3O35393 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Efnb3O35393 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Efnb3O35393 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Efnb3O35393 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Efnb3O35393 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Efnb3O35393 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Efnb3O35393 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Efnb3O35393 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Efnb3O35393 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Efnb3O35393 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC13.67□□□□□ -0.22
Efnb3O35393 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Efnb3O35393 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Efnb3O35393 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Efnb3O35393 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Efnb3O35393 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Efnb3O35393 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Efnb3O35393 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Efnb3O35393 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Efnb3O35393 Gm20628-201ENSMUST00000177363 3215 ntBASIC13.66□□□□□ -0.22
Efnb3O35393 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Efnb3O35393 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Efnb3O35393 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Efnb3O35393 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Efnb3O35393 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms