Protein–RNA interactions for Protein: A0A140T8N6

Trbv13-2, T cell receptor beta, variable 13-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-2A0A140T8N6 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Trbv13-2A0A140T8N6 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv13-2A0A140T8N6 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC12.08□□□□□ -0.48
Trbv13-2A0A140T8N6 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv13-2A0A140T8N6 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv13-2A0A140T8N6 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Trbv13-2A0A140T8N6 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv13-2A0A140T8N6 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv13-2A0A140T8N6 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trbv13-2A0A140T8N6 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC12.07□□□□□ -0.48
Trbv13-2A0A140T8N6 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv13-2A0A140T8N6 Gm43702-201ENSMUST00000198772 2546 ntBASIC12.07□□□□□ -0.48
Trbv13-2A0A140T8N6 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv13-2A0A140T8N6 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC12.07□□□□□ -0.48
Trbv13-2A0A140T8N6 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trbv13-2A0A140T8N6 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC12.07□□□□□ -0.48
Trbv13-2A0A140T8N6 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv13-2A0A140T8N6 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv13-2A0A140T8N6 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC12.07□□□□□ -0.48
Trbv13-2A0A140T8N6 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv13-2A0A140T8N6 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv13-2A0A140T8N6 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC12.07□□□□□ -0.48
Trbv13-2A0A140T8N6 Mir8112-201ENSMUST00000184382 131 ntBASIC12.07□□□□□ -0.48
Trbv13-2A0A140T8N6 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv13-2A0A140T8N6 Gm37292-201ENSMUST00000192062 758 ntBASIC12.07□□□□□ -0.48
Trbv13-2A0A140T8N6 Gm43183-201ENSMUST00000200632 547 ntBASIC12.07□□□□□ -0.48
Trbv13-2A0A140T8N6 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC12.07□□□□□ -0.48
Trbv13-2A0A140T8N6 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv13-2A0A140T8N6 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv13-2A0A140T8N6 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv13-2A0A140T8N6 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv13-2A0A140T8N6 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv13-2A0A140T8N6 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv13-2A0A140T8N6 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trbv13-2A0A140T8N6 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv13-2A0A140T8N6 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv13-2A0A140T8N6 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trbv13-2A0A140T8N6 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv13-2A0A140T8N6 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv13-2A0A140T8N6 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv13-2A0A140T8N6 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv13-2A0A140T8N6 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv13-2A0A140T8N6 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC12.06□□□□□ -0.48
Trbv13-2A0A140T8N6 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv13-2A0A140T8N6 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC12.06□□□□□ -0.48
Trbv13-2A0A140T8N6 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv13-2A0A140T8N6 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv13-2A0A140T8N6 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trbv13-2A0A140T8N6 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC12.06□□□□□ -0.48
Trbv13-2A0A140T8N6 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv13-2A0A140T8N6 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv13-2A0A140T8N6 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv13-2A0A140T8N6 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv13-2A0A140T8N6 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC12.06□□□□□ -0.48
Trbv13-2A0A140T8N6 Gm10698-201ENSMUST00000182663 604 ntBASIC12.06□□□□□ -0.48
Trbv13-2A0A140T8N6 Gm8520-201ENSMUST00000186517 868 ntBASIC12.06□□□□□ -0.48
Trbv13-2A0A140T8N6 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC12.06□□□□□ -0.48
Trbv13-2A0A140T8N6 Spcs1-207ENSMUST00000228767 1008 ntBASIC12.06□□□□□ -0.48
Trbv13-2A0A140T8N6 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv13-2A0A140T8N6 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
Trbv13-2A0A140T8N6 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv13-2A0A140T8N6 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trbv13-2A0A140T8N6 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv13-2A0A140T8N6 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv13-2A0A140T8N6 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv13-2A0A140T8N6 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv13-2A0A140T8N6 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Trbv13-2A0A140T8N6 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC12.05□□□□□ -0.48
Trbv13-2A0A140T8N6 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv13-2A0A140T8N6 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv13-2A0A140T8N6 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv13-2A0A140T8N6 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv13-2A0A140T8N6 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv13-2A0A140T8N6 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trbv13-2A0A140T8N6 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv13-2A0A140T8N6 Gm27011-201ENSMUST00000182352 972 ntBASIC12.05□□□□□ -0.48
Trbv13-2A0A140T8N6 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv13-2A0A140T8N6 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv13-2A0A140T8N6 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv13-2A0A140T8N6 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trbv13-2A0A140T8N6 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv13-2A0A140T8N6 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv13-2A0A140T8N6 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv13-2A0A140T8N6 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv13-2A0A140T8N6 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv13-2A0A140T8N6 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv13-2A0A140T8N6 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trbv13-2A0A140T8N6 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv13-2A0A140T8N6 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv13-2A0A140T8N6 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv13-2A0A140T8N6 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC12.04□□□□□ -0.48
Trbv13-2A0A140T8N6 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv13-2A0A140T8N6 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv13-2A0A140T8N6 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv13-2A0A140T8N6 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC12.04□□□□□ -0.48
Trbv13-2A0A140T8N6 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv13-2A0A140T8N6 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv13-2A0A140T8N6 Gm43272-201ENSMUST00000200599 1584 ntBASIC12.04□□□□□ -0.48
Trbv13-2A0A140T8N6 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv13-2A0A140T8N6 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms