Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC13.14□□□□□ -0.31
Trav16nA0A075B634 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC13.14□□□□□ -0.31
Trav16nA0A075B634 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav16nA0A075B634 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav16nA0A075B634 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav16nA0A075B634 Haglr-201ENSMUST00000100000 2085 ntBASIC13.14□□□□□ -0.31
Trav16nA0A075B634 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav16nA0A075B634 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav16nA0A075B634 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav16nA0A075B634 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav16nA0A075B634 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav16nA0A075B634 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav16nA0A075B634 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav16nA0A075B634 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav16nA0A075B634 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Trav16nA0A075B634 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC13.13□□□□□ -0.31
Trav16nA0A075B634 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Trav16nA0A075B634 Gm45417-201ENSMUST00000209533 758 ntBASIC13.13□□□□□ -0.31
Trav16nA0A075B634 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav16nA0A075B634 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav16nA0A075B634 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav16nA0A075B634 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav16nA0A075B634 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trav16nA0A075B634 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trav16nA0A075B634 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav16nA0A075B634 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trav16nA0A075B634 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav16nA0A075B634 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Trav16nA0A075B634 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC13.13□□□□□ -0.31
Trav16nA0A075B634 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav16nA0A075B634 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav16nA0A075B634 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav16nA0A075B634 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav16nA0A075B634 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav16nA0A075B634 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav16nA0A075B634 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav16nA0A075B634 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav16nA0A075B634 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav16nA0A075B634 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC13.12□□□□□ -0.31
Trav16nA0A075B634 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav16nA0A075B634 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav16nA0A075B634 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC13.12□□□□□ -0.31
Trav16nA0A075B634 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav16nA0A075B634 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav16nA0A075B634 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav16nA0A075B634 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav16nA0A075B634 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav16nA0A075B634 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav16nA0A075B634 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trav16nA0A075B634 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trav16nA0A075B634 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav16nA0A075B634 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Trav16nA0A075B634 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav16nA0A075B634 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav16nA0A075B634 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav16nA0A075B634 Gm16401-202ENSMUST00000197463 2074 ntBASIC13.11□□□□□ -0.31
Trav16nA0A075B634 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav16nA0A075B634 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav16nA0A075B634 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav16nA0A075B634 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav16nA0A075B634 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Trav16nA0A075B634 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav16nA0A075B634 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav16nA0A075B634 Gm13234-201ENSMUST00000120010 747 ntBASIC13.11□□□□□ -0.31
Trav16nA0A075B634 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav16nA0A075B634 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC13.11□□□□□ -0.31
Trav16nA0A075B634 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav16nA0A075B634 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC13.11□□□□□ -0.31
Trav16nA0A075B634 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trav16nA0A075B634 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
Trav16nA0A075B634 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav16nA0A075B634 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav16nA0A075B634 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav16nA0A075B634 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav16nA0A075B634 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Trav16nA0A075B634 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav16nA0A075B634 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav16nA0A075B634 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav16nA0A075B634 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav16nA0A075B634 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav16nA0A075B634 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav16nA0A075B634 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav16nA0A075B634 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav16nA0A075B634 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav16nA0A075B634 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav16nA0A075B634 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav16nA0A075B634 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav16nA0A075B634 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav16nA0A075B634 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav16nA0A075B634 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav16nA0A075B634 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav16nA0A075B634 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav16nA0A075B634 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trav16nA0A075B634 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC13.1□□□□□ -0.31
Trav16nA0A075B634 Gm10655-201ENSMUST00000098658 1397 ntBASIC13.1□□□□□ -0.31
Trav16nA0A075B634 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav16nA0A075B634 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Trav16nA0A075B634 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav16nA0A075B634 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC13.1□□□□□ -0.31
Trav16nA0A075B634 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms