Protein–RNA interactions for Protein: A4IF42

Gm4559, ENSMUSG00000056885 protein (Fragment), mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4559A4IF42 Greb1-201ENSMUST00000048064 7940 ntAPPRIS P3 TSL 1 (best) BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Zc3h11a-201ENSMUST00000027736 4395 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Unc45b-205ENSMUST00000164945 3555 ntAPPRIS ALT1 TSL 5 BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Gm12394-201ENSMUST00000107981 3348 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Nefm-201ENSMUST00000022638 3334 ntAPPRIS P2 TSL 1 (best) BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Htr2c-201ENSMUST00000036303 4747 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Eps8-202ENSMUST00000100841 4151 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Smarcal1-201ENSMUST00000047615 3059 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Vmn1r181-208ENSMUST00000228842 4491 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Tcaf2-201ENSMUST00000031879 4497 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Gm20715-201ENSMUST00000054781 4460 ntAPPRIS P1 TSL 2 BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Gm17230-201ENSMUST00000171194 3942 ntBASIC1.07□□□□□ -2.24
Gm4559A4IF42 Zfp445-206ENSMUST00000216063 6189 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Etl4-203ENSMUST00000114604 4786 ntAPPRIS ALT2 TSL 1 (best) BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Nfam1-201ENSMUST00000023076 2811 ntAPPRIS ALT2 TSL 1 (best) BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Ehbp1-201ENSMUST00000045167 4821 ntAPPRIS P3 TSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Klf7-202ENSMUST00000114086 7662 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Ddx60-202ENSMUST00000093485 5989 ntAPPRIS ALT2 TSL 5 BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Aar2-201ENSMUST00000029158 3427 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Stk38l-201ENSMUST00000001675 4550 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Sulf1-205ENSMUST00000186051 4563 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 4930539E08Rik-201ENSMUST00000062357 4597 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Ranbp6-201ENSMUST00000099525 4575 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Dnajb13-204ENSMUST00000207405 2592 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Ptchd4-201ENSMUST00000048691 6890 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Wdr72-205ENSMUST00000215440 5160 ntAPPRIS ALT2 TSL 5 BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Wdr72-201ENSMUST00000055879 5196 ntAPPRIS P2 TSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Gm45477-201ENSMUST00000200213 5498 ntBASIC1.06□□□□□ -2.24
Gm4559A4IF42 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Gm17638-201ENSMUST00000181255 4343 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Abcb1b-201ENSMUST00000009058 4306 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Tacc2-208ENSMUST00000207549 3492 ntAPPRIS ALT2 TSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Sept6-201ENSMUST00000053456 4673 ntAPPRIS ALT1 TSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 AC135669.2-201ENSMUST00000215636 4958 ntBASIC1.06□□□□□ -2.24
Gm4559A4IF42 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Gm44168-201ENSMUST00000204835 3539 ntBASIC1.06□□□□□ -2.24
Gm4559A4IF42 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Arhgef38-202ENSMUST00000147041 6541 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
Gm4559A4IF42 E2f7-204ENSMUST00000173471 3567 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Mical1-201ENSMUST00000019967 3563 ntAPPRIS P2 TSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Alkbh1-209ENSMUST00000162961 3857 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Gm19719-201ENSMUST00000200934 4230 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Slco5a1-206ENSMUST00000147606 3615 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Musk-205ENSMUST00000102893 3323 ntTSL 5 BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Trappc9-201ENSMUST00000023276 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Vmn1r184-203ENSMUST00000227232 8472 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Cog4-202ENSMUST00000165867 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC1.06□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms