Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
TRIM48Q8IWZ4 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC7.68□□□□□ -1.18
TRIM48Q8IWZ4 HBS1L-202ENST00000367820 638 ntTSL 3 BASIC7.68□□□□□ -1.18
TRIM48Q8IWZ4 AC068389.3-201ENST00000373384 529 ntTSL 4 BASIC7.68□□□□□ -1.18
TRIM48Q8IWZ4 AF228730.1-201ENST00000397972 663 ntBASIC7.68□□□□□ -1.18
TRIM48Q8IWZ4 SLC2A11-205ENST00000403208 564 ntTSL 4 BASIC7.68□□□□□ -1.18
TRIM48Q8IWZ4 AL589655.1-201ENST00000405398 482 ntBASIC7.68□□□□□ -1.18
TRIM48Q8IWZ4 FTH1P26-201ENST00000406512 701 ntBASIC7.68□□□□□ -1.18
TRIM48Q8IWZ4 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC7.68□□□□□ -1.18
TRIM48Q8IWZ4 AP001042.1-201ENST00000416842 487 ntTSL 3 BASIC7.68□□□□□ -1.18
TRIM48Q8IWZ4 CSE1L-AS1-201ENST00000417781 556 ntTSL 2 BASIC7.68□□□□□ -1.18
TRIM48Q8IWZ4 AL590714.1-201ENST00000420498 379 ntTSL 3 BASIC7.68□□□□□ -1.18
TRIM48Q8IWZ4 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC7.68□□□□□ -1.18
TRIM48Q8IWZ4 NDUFA5P1-201ENST00000433858 341 ntBASIC7.68□□□□□ -1.18
TRIM48Q8IWZ4 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC7.68□□□□□ -1.18
TRIM48Q8IWZ4 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC7.68□□□□□ -1.18
TRIM48Q8IWZ4 LINC00460-203ENST00000444865 739 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
TRIM48Q8IWZ4 MKNK1-207ENST00000465783 464 ntTSL 2 BASIC7.68□□□□□ -1.18
TRIM48Q8IWZ4 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC7.68□□□□□ -1.18
TRIM48Q8IWZ4 RPS3AP15-201ENST00000483874 781 ntBASIC7.68□□□□□ -1.18
TRIM48Q8IWZ4 AC127024.1-201ENST00000490847 418 ntBASIC7.68□□□□□ -1.18
TRIM48Q8IWZ4 AC105233.1-201ENST00000498840 781 ntBASIC7.68□□□□□ -1.18
TRIM48Q8IWZ4 AC114300.1-201ENST00000502347 280 ntBASIC7.68□□□□□ -1.18
TRIM48Q8IWZ4 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC7.68□□□□□ -1.18
TRIM48Q8IWZ4 SERPINA15P-201ENST00000529287 266 ntBASIC7.68□□□□□ -1.18
TRIM48Q8IWZ4 AC044839.1-209ENST00000529769 878 ntTSL 5 BASIC7.68□□□□□ -1.18
TRIM48Q8IWZ4 AC024257.1-201ENST00000547523 566 ntTSL 4 BASIC7.68□□□□□ -1.18
TRIM48Q8IWZ4 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC7.68□□□□□ -1.18
TRIM48Q8IWZ4 AL355076.3-201ENST00000555838 587 ntBASIC7.68□□□□□ -1.18
TRIM48Q8IWZ4 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
TRIM48Q8IWZ4 AC234775.3-201ENST00000564612 656 ntBASIC7.68□□□□□ -1.18
TRIM48Q8IWZ4 LINC01974-201ENST00000575126 494 ntTSL 3 BASIC7.68□□□□□ -1.18
TRIM48Q8IWZ4 AC020915.5-201ENST00000596836 964 ntBASIC7.68□□□□□ -1.18
TRIM48Q8IWZ4 AC120053.1-201ENST00000607706 736 ntBASIC7.68□□□□□ -1.18
TRIM48Q8IWZ4 AC000068.3-201ENST00000607934 427 ntBASIC7.68□□□□□ -1.18
TRIM48Q8IWZ4 AC016394.1-201ENST00000608444 833 ntBASIC7.68□□□□□ -1.18
TRIM48Q8IWZ4 Metazoa_SRP.189-201ENST00000614219 303 ntBASIC7.68□□□□□ -1.18
TRIM48Q8IWZ4 AC009039.2-201ENST00000624524 529 ntBASIC7.68□□□□□ -1.18
TRIM48Q8IWZ4 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC7.68□□□□□ -1.18
TRIM48Q8IWZ4 SPRR5-201ENST00000636302 817 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
TRIM48Q8IWZ4 AL445984.1-201ENST00000637834 659 ntBASIC7.68□□□□□ -1.18
TRIM48Q8IWZ4 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC7.68□□□□□ -1.18
TRIM48Q8IWZ4 TMEM135-202ENST00000340353 3938 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
TRIM48Q8IWZ4 AC091132.4-201ENST00000587960 2262 ntBASIC7.68□□□□□ -1.18
TRIM48Q8IWZ4 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
TRIM48Q8IWZ4 CCDC77-203ENST00000422000 2338 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
TRIM48Q8IWZ4 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC7.68□□□□□ -1.18
TRIM48Q8IWZ4 EVI2A-203ENST00000462804 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
TRIM48Q8IWZ4 GIMAP2-201ENST00000223293 1449 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
TRIM48Q8IWZ4 MARK2P10-201ENST00000454959 1437 ntBASIC7.68□□□□□ -1.18
TRIM48Q8IWZ4 AL031123.2-201ENST00000563225 3325 ntBASIC7.68□□□□□ -1.18
TRIM48Q8IWZ4 ATP1A4-201ENST00000368081 3839 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
TRIM48Q8IWZ4 CLCN3P1-202ENST00000609203 1944 ntTSL 2 BASIC7.68□□□□□ -1.18
TRIM48Q8IWZ4 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
TRIM48Q8IWZ4 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC7.68□□□□□ -1.18
TRIM48Q8IWZ4 GNG12-201ENST00000370982 4404 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
TRIM48Q8IWZ4 CCNB2-205ENST00000621385 2503 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
TRIM48Q8IWZ4 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
TRIM48Q8IWZ4 OSGIN2-201ENST00000297438 4209 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
TRIM48Q8IWZ4 CACNB2-213ENST00000612134 3825 ntTSL 5 BASIC7.67□□□□□ -1.18
TRIM48Q8IWZ4 ZNF670-ZNF695-202ENST00000474541 2751 ntAPPRIS ALT2 TSL 2 BASIC7.67□□□□□ -1.18
TRIM48Q8IWZ4 GTF2H1-210ENST00000530496 1700 ntTSL 2 BASIC7.67□□□□□ -1.18
TRIM48Q8IWZ4 OPALIN-203ENST00000393871 3545 ntTSL 2 BASIC7.67□□□□□ -1.18
TRIM48Q8IWZ4 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
TRIM48Q8IWZ4 CAST-222ENST00000508579 1758 ntTSL 2 BASIC7.67□□□□□ -1.18
TRIM48Q8IWZ4 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
TRIM48Q8IWZ4 ZNF680-201ENST00000309683 3022 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
TRIM48Q8IWZ4 MYB-235ENST00000533624 1818 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
TRIM48Q8IWZ4 MYB-238ENST00000534044 1812 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
TRIM48Q8IWZ4 SSR1-210ENST00000489567 1893 ntTSL 3 BASIC7.67□□□□□ -1.18
TRIM48Q8IWZ4 DNAI1-201ENST00000242317 2504 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
TRIM48Q8IWZ4 NF1P2-201ENST00000556855 2505 ntBASIC7.67□□□□□ -1.18
TRIM48Q8IWZ4 OR8J1-201ENST00000303039 1074 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
TRIM48Q8IWZ4 DEFB105A-201ENST00000334773 330 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
TRIM48Q8IWZ4 U3.1-201ENST00000362500 215 ntBASIC7.67□□□□□ -1.18
TRIM48Q8IWZ4 AL450124.1-201ENST00000376401 353 ntBASIC7.67□□□□□ -1.18
TRIM48Q8IWZ4 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
TRIM48Q8IWZ4 MIR1272-201ENST00000408106 129 ntBASIC7.67□□□□□ -1.18
TRIM48Q8IWZ4 RPS3AP25-201ENST00000411660 793 ntBASIC7.67□□□□□ -1.18
TRIM48Q8IWZ4 RBMY2GP-201ENST00000418671 1034 ntBASIC7.67□□□□□ -1.18
TRIM48Q8IWZ4 MTCO2P1-201ENST00000424648 477 ntBASIC7.67□□□□□ -1.18
TRIM48Q8IWZ4 AL445218.1-202ENST00000427695 845 ntTSL 3 BASIC7.67□□□□□ -1.18
TRIM48Q8IWZ4 RBMY2NP-201ENST00000434454 1028 ntBASIC7.67□□□□□ -1.18
TRIM48Q8IWZ4 LINC00460-201ENST00000435024 631 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
TRIM48Q8IWZ4 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC7.67□□□□□ -1.18
TRIM48Q8IWZ4 AC239860.1-201ENST00000444680 1270 ntBASIC7.67□□□□□ -1.18
TRIM48Q8IWZ4 GPR141-202ENST00000447769 1270 ntAPPRIS P1 TSL 3 BASIC7.67□□□□□ -1.18
TRIM48Q8IWZ4 ENTPD1-AS1-206ENST00000449197 523 ntTSL 2 BASIC7.67□□□□□ -1.18
TRIM48Q8IWZ4 AL024493.1-201ENST00000449217 833 ntBASIC7.67□□□□□ -1.18
TRIM48Q8IWZ4 RPS29P5-201ENST00000452777 171 ntBASIC7.67□□□□□ -1.18
TRIM48Q8IWZ4 MTATP6P14-201ENST00000455189 673 ntBASIC7.67□□□□□ -1.18
TRIM48Q8IWZ4 ASPA-202ENST00000456349 1090 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
TRIM48Q8IWZ4 FAM74A1-201ENST00000465257 623 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
TRIM48Q8IWZ4 RPS2P25-201ENST00000467247 580 ntBASIC7.67□□□□□ -1.18
TRIM48Q8IWZ4 AC109454.1-201ENST00000471205 498 ntBASIC7.67□□□□□ -1.18
TRIM48Q8IWZ4 AC093827.1-201ENST00000480094 861 ntBASIC7.67□□□□□ -1.18
TRIM48Q8IWZ4 AC093297.2-201ENST00000503452 738 ntTSL 2 BASIC7.67□□□□□ -1.18
TRIM48Q8IWZ4 CAPSL-204ENST00000514524 656 ntTSL 2 BASIC7.67□□□□□ -1.18
TRIM48Q8IWZ4 IGHV7-40-201ENST00000520963 296 ntBASIC7.67□□□□□ -1.18
TRIM48Q8IWZ4 RAB30-205ENST00000527633 792 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms