Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC13.51□□□□□ -0.25
CcsQ9WU84 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CcsQ9WU84 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CcsQ9WU84 CT030146.1-201ENSMUST00000220919 217 ntBASIC13.51□□□□□ -0.25
CcsQ9WU84 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CcsQ9WU84 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CcsQ9WU84 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CcsQ9WU84 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CcsQ9WU84 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
CcsQ9WU84 Gm43598-201ENSMUST00000202482 2479 ntBASIC13.51□□□□□ -0.25
CcsQ9WU84 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
CcsQ9WU84 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC13.51□□□□□ -0.25
CcsQ9WU84 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CcsQ9WU84 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC13.51□□□□□ -0.25
CcsQ9WU84 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CcsQ9WU84 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
CcsQ9WU84 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
CcsQ9WU84 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
CcsQ9WU84 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CcsQ9WU84 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CcsQ9WU84 Reep4-203ENSMUST00000226563 1444 ntBASIC13.5□□□□□ -0.25
CcsQ9WU84 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CcsQ9WU84 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CcsQ9WU84 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
CcsQ9WU84 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CcsQ9WU84 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
CcsQ9WU84 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC13.5□□□□□ -0.25
CcsQ9WU84 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC13.5□□□□□ -0.25
CcsQ9WU84 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CcsQ9WU84 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC13.5□□□□□ -0.25
CcsQ9WU84 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
CcsQ9WU84 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CcsQ9WU84 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CcsQ9WU84 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CcsQ9WU84 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CcsQ9WU84 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
CcsQ9WU84 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CcsQ9WU84 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CcsQ9WU84 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CcsQ9WU84 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CcsQ9WU84 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC13.5□□□□□ -0.25
CcsQ9WU84 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
CcsQ9WU84 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
CcsQ9WU84 AC069562.2-201ENSMUST00000224644 2146 ntBASIC13.49□□□□□ -0.25
CcsQ9WU84 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CcsQ9WU84 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CcsQ9WU84 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC13.49□□□□□ -0.25
CcsQ9WU84 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
CcsQ9WU84 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC13.49□□□□□ -0.25
CcsQ9WU84 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CcsQ9WU84 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CcsQ9WU84 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CcsQ9WU84 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CcsQ9WU84 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CcsQ9WU84 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CcsQ9WU84 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CcsQ9WU84 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC13.49□□□□□ -0.25
CcsQ9WU84 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CcsQ9WU84 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
CcsQ9WU84 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CcsQ9WU84 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CcsQ9WU84 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CcsQ9WU84 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
CcsQ9WU84 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CcsQ9WU84 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CcsQ9WU84 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CcsQ9WU84 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
CcsQ9WU84 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CcsQ9WU84 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC13.48□□□□□ -0.25
CcsQ9WU84 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC13.48□□□□□ -0.25
CcsQ9WU84 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CcsQ9WU84 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC13.48□□□□□ -0.25
CcsQ9WU84 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CcsQ9WU84 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CcsQ9WU84 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CcsQ9WU84 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
CcsQ9WU84 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CcsQ9WU84 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CcsQ9WU84 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CcsQ9WU84 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CcsQ9WU84 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
CcsQ9WU84 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CcsQ9WU84 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CcsQ9WU84 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CcsQ9WU84 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CcsQ9WU84 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
CcsQ9WU84 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CcsQ9WU84 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CcsQ9WU84 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CcsQ9WU84 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CcsQ9WU84 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CcsQ9WU84 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CcsQ9WU84 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CcsQ9WU84 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CcsQ9WU84 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CcsQ9WU84 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CcsQ9WU84 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CcsQ9WU84 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CcsQ9WU84 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC13.47□□□□□ -0.25
CcsQ9WU84 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms