Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Gm42642-201ENSMUST00000200683 355 ntBASIC17.51■□□□□ 0.39
Cdk9Q99J95 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
Cdk9Q99J95 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdk9Q99J95 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdk9Q99J95 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdk9Q99J95 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdk9Q99J95 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdk9Q99J95 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Cdk9Q99J95 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cdk9Q99J95 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdk9Q99J95 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Cdk9Q99J95 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.51■□□□□ 0.39
Cdk9Q99J95 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdk9Q99J95 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.51■□□□□ 0.39
Cdk9Q99J95 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdk9Q99J95 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdk9Q99J95 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.5■□□□□ 0.39
Cdk9Q99J95 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdk9Q99J95 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdk9Q99J95 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.5■□□□□ 0.39
Cdk9Q99J95 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdk9Q99J95 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cdk9Q99J95 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdk9Q99J95 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.5■□□□□ 0.39
Cdk9Q99J95 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Cdk9Q99J95 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdk9Q99J95 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdk9Q99J95 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdk9Q99J95 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdk9Q99J95 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdk9Q99J95 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdk9Q99J95 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdk9Q99J95 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cdk9Q99J95 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdk9Q99J95 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.49■□□□□ 0.39
Cdk9Q99J95 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.49■□□□□ 0.39
Cdk9Q99J95 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.49■□□□□ 0.39
Cdk9Q99J95 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdk9Q99J95 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdk9Q99J95 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdk9Q99J95 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdk9Q99J95 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.49■□□□□ 0.39
Cdk9Q99J95 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdk9Q99J95 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.49■□□□□ 0.39
Cdk9Q99J95 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdk9Q99J95 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdk9Q99J95 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdk9Q99J95 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.48■□□□□ 0.39
Cdk9Q99J95 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdk9Q99J95 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdk9Q99J95 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cdk9Q99J95 Idnk-204ENSMUST00000226010 1898 ntBASIC17.48■□□□□ 0.39
Cdk9Q99J95 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdk9Q99J95 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdk9Q99J95 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.48■□□□□ 0.39
Cdk9Q99J95 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdk9Q99J95 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdk9Q99J95 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdk9Q99J95 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdk9Q99J95 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cdk9Q99J95 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Cdk9Q99J95 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.48■□□□□ 0.39
Cdk9Q99J95 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Cdk9Q99J95 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Cdk9Q99J95 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdk9Q99J95 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdk9Q99J95 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cdk9Q99J95 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdk9Q99J95 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdk9Q99J95 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdk9Q99J95 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdk9Q99J95 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdk9Q99J95 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdk9Q99J95 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Cdk9Q99J95 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cdk9Q99J95 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdk9Q99J95 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdk9Q99J95 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cdk9Q99J95 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdk9Q99J95 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Cdk9Q99J95 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdk9Q99J95 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdk9Q99J95 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cdk9Q99J95 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cdk9Q99J95 Gm9867-201ENSMUST00000192212 2647 ntBASIC17.47■□□□□ 0.39
Cdk9Q99J95 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdk9Q99J95 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdk9Q99J95 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cdk9Q99J95 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Cdk9Q99J95 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cdk9Q99J95 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cdk9Q99J95 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cdk9Q99J95 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Cdk9Q99J95 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cdk9Q99J95 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cdk9Q99J95 Gm13216-201ENSMUST00000117145 591 ntBASIC17.46■□□□□ 0.39
Cdk9Q99J95 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.46■□□□□ 0.39
Cdk9Q99J95 Gm42778-201ENSMUST00000199644 553 ntBASIC17.46■□□□□ 0.39
Cdk9Q99J95 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.46■□□□□ 0.39
Cdk9Q99J95 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms