Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nudcd3Q8R1N4 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.41■□□□□ 0.38
Nudcd3Q8R1N4 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nudcd3Q8R1N4 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Nudcd3Q8R1N4 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nudcd3Q8R1N4 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.4■□□□□ 0.38
Nudcd3Q8R1N4 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nudcd3Q8R1N4 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.4■□□□□ 0.38
Nudcd3Q8R1N4 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nudcd3Q8R1N4 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Nudcd3Q8R1N4 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nudcd3Q8R1N4 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Nudcd3Q8R1N4 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nudcd3Q8R1N4 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nudcd3Q8R1N4 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nudcd3Q8R1N4 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Nudcd3Q8R1N4 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Nudcd3Q8R1N4 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nudcd3Q8R1N4 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nudcd3Q8R1N4 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.39■□□□□ 0.37
Nudcd3Q8R1N4 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Nudcd3Q8R1N4 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.39■□□□□ 0.37
Nudcd3Q8R1N4 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Nudcd3Q8R1N4 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.39■□□□□ 0.37
Nudcd3Q8R1N4 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nudcd3Q8R1N4 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nudcd3Q8R1N4 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Nudcd3Q8R1N4 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nudcd3Q8R1N4 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nudcd3Q8R1N4 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.39■□□□□ 0.37
Nudcd3Q8R1N4 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.39■□□□□ 0.37
Nudcd3Q8R1N4 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nudcd3Q8R1N4 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.38■□□□□ 0.37
Nudcd3Q8R1N4 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Nudcd3Q8R1N4 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nudcd3Q8R1N4 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nudcd3Q8R1N4 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nudcd3Q8R1N4 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nudcd3Q8R1N4 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.38■□□□□ 0.37
Nudcd3Q8R1N4 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.38■□□□□ 0.37
Nudcd3Q8R1N4 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Nudcd3Q8R1N4 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nudcd3Q8R1N4 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Nudcd3Q8R1N4 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Nudcd3Q8R1N4 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nudcd3Q8R1N4 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Nudcd3Q8R1N4 Haglr-201ENSMUST00000100000 2085 ntBASIC17.38■□□□□ 0.37
Nudcd3Q8R1N4 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Nudcd3Q8R1N4 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Nudcd3Q8R1N4 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nudcd3Q8R1N4 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nudcd3Q8R1N4 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nudcd3Q8R1N4 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nudcd3Q8R1N4 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Nudcd3Q8R1N4 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nudcd3Q8R1N4 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.37■□□□□ 0.37
Nudcd3Q8R1N4 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nudcd3Q8R1N4 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.37■□□□□ 0.37
Nudcd3Q8R1N4 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nudcd3Q8R1N4 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nudcd3Q8R1N4 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nudcd3Q8R1N4 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.37■□□□□ 0.37
Nudcd3Q8R1N4 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nudcd3Q8R1N4 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nudcd3Q8R1N4 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nudcd3Q8R1N4 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nudcd3Q8R1N4 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nudcd3Q8R1N4 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nudcd3Q8R1N4 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.36■□□□□ 0.37
Nudcd3Q8R1N4 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nudcd3Q8R1N4 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.36■□□□□ 0.37
Nudcd3Q8R1N4 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nudcd3Q8R1N4 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
Nudcd3Q8R1N4 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nudcd3Q8R1N4 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Nudcd3Q8R1N4 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.36■□□□□ 0.37
Nudcd3Q8R1N4 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nudcd3Q8R1N4 Gm29791-202ENSMUST00000207888 369 ntBASIC17.36■□□□□ 0.37
Nudcd3Q8R1N4 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nudcd3Q8R1N4 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nudcd3Q8R1N4 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nudcd3Q8R1N4 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.36■□□□□ 0.37
Nudcd3Q8R1N4 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Nudcd3Q8R1N4 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nudcd3Q8R1N4 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nudcd3Q8R1N4 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Nudcd3Q8R1N4 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nudcd3Q8R1N4 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nudcd3Q8R1N4 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nudcd3Q8R1N4 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nudcd3Q8R1N4 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nudcd3Q8R1N4 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nudcd3Q8R1N4 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nudcd3Q8R1N4 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nudcd3Q8R1N4 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Nudcd3Q8R1N4 Mir8112-201ENSMUST00000184382 131 ntBASIC17.35■□□□□ 0.37
Nudcd3Q8R1N4 Gm7514-201ENSMUST00000209475 934 ntBASIC17.35■□□□□ 0.37
Nudcd3Q8R1N4 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.35■□□□□ 0.37
Nudcd3Q8R1N4 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Nudcd3Q8R1N4 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms