Protein–RNA interactions for Protein: Q8CDW1

Fam228a, Protein FAM228A, mousemouse

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam228aQ8CDW1 Gm16401-202ENSMUST00000197463 2074 ntBASIC18.27■□□□□ 0.51
Fam228aQ8CDW1 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Fam228aQ8CDW1 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Fam228aQ8CDW1 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Fam228aQ8CDW1 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Fam228aQ8CDW1 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Fam228aQ8CDW1 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Fam228aQ8CDW1 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Fam228aQ8CDW1 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Fam228aQ8CDW1 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Fam228aQ8CDW1 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Fam228aQ8CDW1 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Fam228aQ8CDW1 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Fam228aQ8CDW1 Gm10418-201ENSMUST00000100943 576 ntBASIC18.26■□□□□ 0.51
Fam228aQ8CDW1 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Fam228aQ8CDW1 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Fam228aQ8CDW1 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Fam228aQ8CDW1 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Fam228aQ8CDW1 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Fam228aQ8CDW1 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Fam228aQ8CDW1 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Fam228aQ8CDW1 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
Fam228aQ8CDW1 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Fam228aQ8CDW1 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Fam228aQ8CDW1 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Fam228aQ8CDW1 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Fam228aQ8CDW1 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Fam228aQ8CDW1 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Fam228aQ8CDW1 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Fam228aQ8CDW1 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.25■□□□□ 0.51
Fam228aQ8CDW1 Gm10033-202ENSMUST00000211874 928 ntBASIC18.25■□□□□ 0.51
Fam228aQ8CDW1 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC18.25■□□□□ 0.51
Fam228aQ8CDW1 Haglr-201ENSMUST00000100000 2085 ntBASIC18.25■□□□□ 0.51
Fam228aQ8CDW1 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC18.25■□□□□ 0.51
Fam228aQ8CDW1 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.25■□□□□ 0.51
Fam228aQ8CDW1 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Fam228aQ8CDW1 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Fam228aQ8CDW1 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC18.25■□□□□ 0.51
Fam228aQ8CDW1 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Fam228aQ8CDW1 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC18.24■□□□□ 0.51
Fam228aQ8CDW1 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Fam228aQ8CDW1 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Fam228aQ8CDW1 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Fam228aQ8CDW1 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.24■□□□□ 0.51
Fam228aQ8CDW1 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Fam228aQ8CDW1 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.24■□□□□ 0.51
Fam228aQ8CDW1 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Fam228aQ8CDW1 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Fam228aQ8CDW1 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Fam228aQ8CDW1 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Fam228aQ8CDW1 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Fam228aQ8CDW1 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Fam228aQ8CDW1 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Fam228aQ8CDW1 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Fam228aQ8CDW1 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Fam228aQ8CDW1 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Fam228aQ8CDW1 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Fam228aQ8CDW1 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.23■□□□□ 0.51
Fam228aQ8CDW1 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Fam228aQ8CDW1 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Fam228aQ8CDW1 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.23■□□□□ 0.51
Fam228aQ8CDW1 Gm18671-201ENSMUST00000214826 683 ntBASIC18.23■□□□□ 0.51
Fam228aQ8CDW1 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Fam228aQ8CDW1 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Fam228aQ8CDW1 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Fam228aQ8CDW1 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Fam228aQ8CDW1 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Fam228aQ8CDW1 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Fam228aQ8CDW1 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Fam228aQ8CDW1 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Fam228aQ8CDW1 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Fam228aQ8CDW1 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Fam228aQ8CDW1 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Fam228aQ8CDW1 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Fam228aQ8CDW1 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.22■□□□□ 0.51
Fam228aQ8CDW1 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Fam228aQ8CDW1 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Fam228aQ8CDW1 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Fam228aQ8CDW1 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Fam228aQ8CDW1 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Fam228aQ8CDW1 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Fam228aQ8CDW1 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Fam228aQ8CDW1 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.22■□□□□ 0.51
Fam228aQ8CDW1 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.22■□□□□ 0.51
Fam228aQ8CDW1 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.22■□□□□ 0.51
Fam228aQ8CDW1 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.22■□□□□ 0.51
Fam228aQ8CDW1 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Fam228aQ8CDW1 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Fam228aQ8CDW1 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Fam228aQ8CDW1 Gm45412-201ENSMUST00000210217 2275 ntBASIC18.22■□□□□ 0.51
Fam228aQ8CDW1 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Fam228aQ8CDW1 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Fam228aQ8CDW1 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Fam228aQ8CDW1 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Fam228aQ8CDW1 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Fam228aQ8CDW1 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Fam228aQ8CDW1 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Fam228aQ8CDW1 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Fam228aQ8CDW1 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Fam228aQ8CDW1 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms