Protein–RNA interactions for Protein: Q8BR37

Nhlrc1, E3 ubiquitin-protein ligase NHLRC1, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc1Q8BR37 Gm45606-201ENSMUST00000209836 2795 ntBASIC13.49□□□□□ -0.25
Nhlrc1Q8BR37 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nhlrc1Q8BR37 BC021767-201ENSMUST00000126387 1716 ntBASIC13.49□□□□□ -0.25
Nhlrc1Q8BR37 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nhlrc1Q8BR37 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Nhlrc1Q8BR37 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Nhlrc1Q8BR37 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Nhlrc1Q8BR37 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Nhlrc1Q8BR37 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nhlrc1Q8BR37 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nhlrc1Q8BR37 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Nhlrc1Q8BR37 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Nhlrc1Q8BR37 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nhlrc1Q8BR37 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nhlrc1Q8BR37 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nhlrc1Q8BR37 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nhlrc1Q8BR37 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Nhlrc1Q8BR37 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Nhlrc1Q8BR37 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Nhlrc1Q8BR37 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Nhlrc1Q8BR37 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC13.48□□□□□ -0.25
Nhlrc1Q8BR37 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC13.48□□□□□ -0.25
Nhlrc1Q8BR37 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Nhlrc1Q8BR37 Gm38027-201ENSMUST00000192315 235 ntBASIC13.48□□□□□ -0.25
Nhlrc1Q8BR37 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC13.48□□□□□ -0.25
Nhlrc1Q8BR37 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Nhlrc1Q8BR37 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nhlrc1Q8BR37 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Nhlrc1Q8BR37 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC13.48□□□□□ -0.25
Nhlrc1Q8BR37 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Nhlrc1Q8BR37 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nhlrc1Q8BR37 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nhlrc1Q8BR37 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nhlrc1Q8BR37 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Nhlrc1Q8BR37 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nhlrc1Q8BR37 Rncr4-201ENSMUST00000194541 2234 ntBASIC13.47□□□□□ -0.25
Nhlrc1Q8BR37 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nhlrc1Q8BR37 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nhlrc1Q8BR37 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Nhlrc1Q8BR37 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nhlrc1Q8BR37 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC13.47□□□□□ -0.25
Nhlrc1Q8BR37 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nhlrc1Q8BR37 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nhlrc1Q8BR37 Gm2274-201ENSMUST00000184539 609 ntBASIC13.47□□□□□ -0.25
Nhlrc1Q8BR37 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nhlrc1Q8BR37 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC13.47□□□□□ -0.25
Nhlrc1Q8BR37 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nhlrc1Q8BR37 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nhlrc1Q8BR37 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nhlrc1Q8BR37 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nhlrc1Q8BR37 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nhlrc1Q8BR37 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nhlrc1Q8BR37 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nhlrc1Q8BR37 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nhlrc1Q8BR37 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nhlrc1Q8BR37 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC13.46□□□□□ -0.25
Nhlrc1Q8BR37 Haglr-201ENSMUST00000100000 2085 ntBASIC13.46□□□□□ -0.25
Nhlrc1Q8BR37 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nhlrc1Q8BR37 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC13.46□□□□□ -0.25
Nhlrc1Q8BR37 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nhlrc1Q8BR37 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Nhlrc1Q8BR37 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC13.46□□□□□ -0.25
Nhlrc1Q8BR37 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Nhlrc1Q8BR37 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nhlrc1Q8BR37 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nhlrc1Q8BR37 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nhlrc1Q8BR37 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC13.46□□□□□ -0.25
Nhlrc1Q8BR37 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Nhlrc1Q8BR37 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC13.46□□□□□ -0.25
Nhlrc1Q8BR37 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nhlrc1Q8BR37 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nhlrc1Q8BR37 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nhlrc1Q8BR37 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nhlrc1Q8BR37 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nhlrc1Q8BR37 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Nhlrc1Q8BR37 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Nhlrc1Q8BR37 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Nhlrc1Q8BR37 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Nhlrc1Q8BR37 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Nhlrc1Q8BR37 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nhlrc1Q8BR37 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC13.45□□□□□ -0.26
Nhlrc1Q8BR37 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC13.45□□□□□ -0.26
Nhlrc1Q8BR37 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nhlrc1Q8BR37 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nhlrc1Q8BR37 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Nhlrc1Q8BR37 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nhlrc1Q8BR37 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC13.45□□□□□ -0.26
Nhlrc1Q8BR37 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Nhlrc1Q8BR37 Gm12085-201ENSMUST00000119263 940 ntBASIC13.45□□□□□ -0.26
Nhlrc1Q8BR37 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nhlrc1Q8BR37 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC13.45□□□□□ -0.26
Nhlrc1Q8BR37 Gm6659-201ENSMUST00000174752 547 ntBASIC13.45□□□□□ -0.26
Nhlrc1Q8BR37 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC13.45□□□□□ -0.26
Nhlrc1Q8BR37 Gm45058-201ENSMUST00000205810 766 ntBASIC13.45□□□□□ -0.26
Nhlrc1Q8BR37 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC13.45□□□□□ -0.26
Nhlrc1Q8BR37 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC13.45□□□□□ -0.26
Nhlrc1Q8BR37 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Nhlrc1Q8BR37 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Nhlrc1Q8BR37 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nhlrc1Q8BR37 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms