Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sfr1Q8BP27 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sfr1Q8BP27 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Sfr1Q8BP27 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
Sfr1Q8BP27 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sfr1Q8BP27 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sfr1Q8BP27 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sfr1Q8BP27 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Sfr1Q8BP27 Gm10517-202ENSMUST00000192970 758 ntBASIC17.64■□□□□ 0.41
Sfr1Q8BP27 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Sfr1Q8BP27 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sfr1Q8BP27 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sfr1Q8BP27 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sfr1Q8BP27 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sfr1Q8BP27 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC17.64■□□□□ 0.41
Sfr1Q8BP27 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Sfr1Q8BP27 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Sfr1Q8BP27 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Sfr1Q8BP27 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sfr1Q8BP27 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.64■□□□□ 0.41
Sfr1Q8BP27 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sfr1Q8BP27 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sfr1Q8BP27 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sfr1Q8BP27 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Sfr1Q8BP27 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sfr1Q8BP27 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sfr1Q8BP27 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Sfr1Q8BP27 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sfr1Q8BP27 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.63■□□□□ 0.41
Sfr1Q8BP27 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sfr1Q8BP27 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sfr1Q8BP27 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Sfr1Q8BP27 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sfr1Q8BP27 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sfr1Q8BP27 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.63■□□□□ 0.41
Sfr1Q8BP27 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sfr1Q8BP27 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sfr1Q8BP27 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sfr1Q8BP27 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.63■□□□□ 0.41
Sfr1Q8BP27 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sfr1Q8BP27 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sfr1Q8BP27 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sfr1Q8BP27 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sfr1Q8BP27 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sfr1Q8BP27 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.62■□□□□ 0.41
Sfr1Q8BP27 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sfr1Q8BP27 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.62■□□□□ 0.41
Sfr1Q8BP27 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sfr1Q8BP27 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.62■□□□□ 0.41
Sfr1Q8BP27 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.62■□□□□ 0.41
Sfr1Q8BP27 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.62■□□□□ 0.41
Sfr1Q8BP27 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.62■□□□□ 0.41
Sfr1Q8BP27 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
Sfr1Q8BP27 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.62■□□□□ 0.41
Sfr1Q8BP27 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Sfr1Q8BP27 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sfr1Q8BP27 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sfr1Q8BP27 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Sfr1Q8BP27 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sfr1Q8BP27 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sfr1Q8BP27 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sfr1Q8BP27 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sfr1Q8BP27 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sfr1Q8BP27 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Sfr1Q8BP27 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.61■□□□□ 0.41
Sfr1Q8BP27 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sfr1Q8BP27 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sfr1Q8BP27 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.61■□□□□ 0.41
Sfr1Q8BP27 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Sfr1Q8BP27 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.61■□□□□ 0.41
Sfr1Q8BP27 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.61■□□□□ 0.41
Sfr1Q8BP27 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Sfr1Q8BP27 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Sfr1Q8BP27 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Sfr1Q8BP27 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sfr1Q8BP27 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sfr1Q8BP27 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Sfr1Q8BP27 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sfr1Q8BP27 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sfr1Q8BP27 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sfr1Q8BP27 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Sfr1Q8BP27 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sfr1Q8BP27 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Sfr1Q8BP27 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sfr1Q8BP27 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sfr1Q8BP27 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sfr1Q8BP27 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sfr1Q8BP27 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sfr1Q8BP27 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sfr1Q8BP27 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.6■□□□□ 0.41
Sfr1Q8BP27 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sfr1Q8BP27 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Sfr1Q8BP27 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.6■□□□□ 0.41
Sfr1Q8BP27 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.6■□□□□ 0.41
Sfr1Q8BP27 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sfr1Q8BP27 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sfr1Q8BP27 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Sfr1Q8BP27 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Sfr1Q8BP27 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sfr1Q8BP27 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms