Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Gm10060-201ENSMUST00000212002 111 ntBASIC18.82■□□□□ 0.6
ShbQ6PD21 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC18.82■□□□□ 0.6
ShbQ6PD21 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ShbQ6PD21 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ShbQ6PD21 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ShbQ6PD21 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ShbQ6PD21 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ShbQ6PD21 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ShbQ6PD21 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
ShbQ6PD21 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ShbQ6PD21 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ShbQ6PD21 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ShbQ6PD21 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ShbQ6PD21 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ShbQ6PD21 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ShbQ6PD21 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ShbQ6PD21 Gm13186-201ENSMUST00000118031 316 ntBASIC18.81■□□□□ 0.6
ShbQ6PD21 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
ShbQ6PD21 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ShbQ6PD21 Gm43575-201ENSMUST00000196420 516 ntBASIC18.81■□□□□ 0.6
ShbQ6PD21 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ShbQ6PD21 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ShbQ6PD21 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ShbQ6PD21 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ShbQ6PD21 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ShbQ6PD21 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ShbQ6PD21 Gm6190-201ENSMUST00000220683 1374 ntBASIC18.81■□□□□ 0.6
ShbQ6PD21 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
ShbQ6PD21 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ShbQ6PD21 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC18.8■□□□□ 0.6
ShbQ6PD21 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
ShbQ6PD21 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ShbQ6PD21 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC18.8■□□□□ 0.6
ShbQ6PD21 Cmtm5-203ENSMUST00000227441 610 ntBASIC18.8■□□□□ 0.6
ShbQ6PD21 AC159093.1-201ENSMUST00000227779 380 ntBASIC18.8■□□□□ 0.6
ShbQ6PD21 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ShbQ6PD21 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ShbQ6PD21 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
ShbQ6PD21 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ShbQ6PD21 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ShbQ6PD21 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.8■□□□□ 0.6
ShbQ6PD21 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.8■□□□□ 0.6
ShbQ6PD21 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ShbQ6PD21 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ShbQ6PD21 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ShbQ6PD21 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ShbQ6PD21 Gm13312-201ENSMUST00000119631 718 ntBASIC18.79■□□□□ 0.6
ShbQ6PD21 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC18.79■□□□□ 0.6
ShbQ6PD21 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
ShbQ6PD21 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC18.79■□□□□ 0.6
ShbQ6PD21 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ShbQ6PD21 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ShbQ6PD21 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ShbQ6PD21 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
ShbQ6PD21 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ShbQ6PD21 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
ShbQ6PD21 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
ShbQ6PD21 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ShbQ6PD21 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ShbQ6PD21 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ShbQ6PD21 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.79■□□□□ 0.6
ShbQ6PD21 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
ShbQ6PD21 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ShbQ6PD21 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ShbQ6PD21 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
ShbQ6PD21 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
ShbQ6PD21 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ShbQ6PD21 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ShbQ6PD21 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC18.78■□□□□ 0.6
ShbQ6PD21 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
ShbQ6PD21 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC18.78■□□□□ 0.6
ShbQ6PD21 Gm13830-205ENSMUST00000201195 1155 ntBASIC18.78■□□□□ 0.6
ShbQ6PD21 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ShbQ6PD21 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ShbQ6PD21 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ShbQ6PD21 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.78■□□□□ 0.6
ShbQ6PD21 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.78■□□□□ 0.6
ShbQ6PD21 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ShbQ6PD21 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
ShbQ6PD21 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ShbQ6PD21 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ShbQ6PD21 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.77■□□□□ 0.6
ShbQ6PD21 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC18.77■□□□□ 0.6
ShbQ6PD21 Rprl3-201ENSMUST00000157400 290 ntBASIC18.77■□□□□ 0.6
ShbQ6PD21 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ShbQ6PD21 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ShbQ6PD21 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ShbQ6PD21 Gm7063-201ENSMUST00000186840 981 ntBASIC18.77■□□□□ 0.6
ShbQ6PD21 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ShbQ6PD21 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ShbQ6PD21 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ShbQ6PD21 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ShbQ6PD21 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.77■□□□□ 0.6
ShbQ6PD21 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ShbQ6PD21 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ShbQ6PD21 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ShbQ6PD21 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
ShbQ6PD21 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
ShbQ6PD21 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.77■□□□□ 0.59
ShbQ6PD21 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms