Protein–RNA interactions for Protein: Q00420

Gabpb1, GA-binding protein subunit beta-1, mousemouse

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabpb1Q00420 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Gabpb1Q00420 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gabpb1Q00420 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gabpb1Q00420 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.65■□□□□ 0.42
Gabpb1Q00420 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gabpb1Q00420 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gabpb1Q00420 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.65■□□□□ 0.42
Gabpb1Q00420 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gabpb1Q00420 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gabpb1Q00420 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.65■□□□□ 0.42
Gabpb1Q00420 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gabpb1Q00420 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
Gabpb1Q00420 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Gabpb1Q00420 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Gabpb1Q00420 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Gabpb1Q00420 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Gabpb1Q00420 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gabpb1Q00420 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gabpb1Q00420 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Gabpb1Q00420 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Gabpb1Q00420 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Gabpb1Q00420 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Gabpb1Q00420 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
Gabpb1Q00420 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.64■□□□□ 0.42
Gabpb1Q00420 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gabpb1Q00420 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gabpb1Q00420 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Gabpb1Q00420 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gabpb1Q00420 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Gabpb1Q00420 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.64■□□□□ 0.41
Gabpb1Q00420 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Gabpb1Q00420 Gm5643-201ENSMUST00000117081 966 ntBASIC17.64■□□□□ 0.41
Gabpb1Q00420 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.64■□□□□ 0.41
Gabpb1Q00420 Gm4974-201ENSMUST00000209974 875 ntBASIC17.64■□□□□ 0.41
Gabpb1Q00420 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.64■□□□□ 0.41
Gabpb1Q00420 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Gabpb1Q00420 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gabpb1Q00420 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.64■□□□□ 0.41
Gabpb1Q00420 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Gabpb1Q00420 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
Gabpb1Q00420 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gabpb1Q00420 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gabpb1Q00420 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.63■□□□□ 0.41
Gabpb1Q00420 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Gabpb1Q00420 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Gabpb1Q00420 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Gabpb1Q00420 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gabpb1Q00420 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.63■□□□□ 0.41
Gabpb1Q00420 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Gabpb1Q00420 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gabpb1Q00420 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gabpb1Q00420 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gabpb1Q00420 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Gabpb1Q00420 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gabpb1Q00420 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gabpb1Q00420 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gabpb1Q00420 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gabpb1Q00420 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Gabpb1Q00420 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Gabpb1Q00420 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Gabpb1Q00420 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.62■□□□□ 0.41
Gabpb1Q00420 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gabpb1Q00420 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Gabpb1Q00420 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Gabpb1Q00420 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gabpb1Q00420 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gabpb1Q00420 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Gabpb1Q00420 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gabpb1Q00420 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gabpb1Q00420 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Gabpb1Q00420 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gabpb1Q00420 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Gabpb1Q00420 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.61■□□□□ 0.41
Gabpb1Q00420 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
Gabpb1Q00420 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Gabpb1Q00420 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gabpb1Q00420 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.61■□□□□ 0.41
Gabpb1Q00420 Gm15378-201ENSMUST00000121894 207 ntBASIC17.61■□□□□ 0.41
Gabpb1Q00420 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.61■□□□□ 0.41
Gabpb1Q00420 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.61■□□□□ 0.41
Gabpb1Q00420 Gm43183-201ENSMUST00000200632 547 ntBASIC17.61■□□□□ 0.41
Gabpb1Q00420 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gabpb1Q00420 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gabpb1Q00420 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Gabpb1Q00420 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gabpb1Q00420 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gabpb1Q00420 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Gabpb1Q00420 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gabpb1Q00420 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gabpb1Q00420 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
Gabpb1Q00420 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Gabpb1Q00420 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gabpb1Q00420 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Gabpb1Q00420 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gabpb1Q00420 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Gabpb1Q00420 Gm10653-202ENSMUST00000139570 835 ntBASIC17.6■□□□□ 0.41
Gabpb1Q00420 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.6■□□□□ 0.41
Gabpb1Q00420 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Gabpb1Q00420 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gabpb1Q00420 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms