Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.4■□□□□ 0.22
Nkx3-2P97503 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx3-2P97503 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.4■□□□□ 0.22
Nkx3-2P97503 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.4■□□□□ 0.22
Nkx3-2P97503 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.4■□□□□ 0.22
Nkx3-2P97503 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx3-2P97503 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx3-2P97503 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx3-2P97503 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx3-2P97503 Gm9987-201ENSMUST00000069768 567 ntBASIC16.4■□□□□ 0.22
Nkx3-2P97503 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Nkx3-2P97503 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx3-2P97503 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Nkx3-2P97503 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx3-2P97503 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx3-2P97503 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
Nkx3-2P97503 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
Nkx3-2P97503 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.39■□□□□ 0.21
Nkx3-2P97503 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx3-2P97503 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx3-2P97503 Gm13559-201ENSMUST00000120476 863 ntBASIC16.39■□□□□ 0.21
Nkx3-2P97503 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.39■□□□□ 0.21
Nkx3-2P97503 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx3-2P97503 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx3-2P97503 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.39■□□□□ 0.21
Nkx3-2P97503 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx3-2P97503 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx3-2P97503 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx3-2P97503 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
Nkx3-2P97503 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx3-2P97503 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx3-2P97503 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx3-2P97503 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx3-2P97503 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx3-2P97503 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx3-2P97503 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx3-2P97503 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx3-2P97503 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.38■□□□□ 0.21
Nkx3-2P97503 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Nkx3-2P97503 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx3-2P97503 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.38■□□□□ 0.21
Nkx3-2P97503 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx3-2P97503 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx3-2P97503 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx3-2P97503 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx3-2P97503 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx3-2P97503 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx3-2P97503 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.38■□□□□ 0.21
Nkx3-2P97503 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx3-2P97503 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.38■□□□□ 0.21
Nkx3-2P97503 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx3-2P97503 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx3-2P97503 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx3-2P97503 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx3-2P97503 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Nkx3-2P97503 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.37■□□□□ 0.21
Nkx3-2P97503 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx3-2P97503 Gm10517-202ENSMUST00000192970 758 ntBASIC16.37■□□□□ 0.21
Nkx3-2P97503 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Nkx3-2P97503 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx3-2P97503 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx3-2P97503 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Nkx3-2P97503 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx3-2P97503 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Nkx3-2P97503 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx3-2P97503 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.37■□□□□ 0.21
Nkx3-2P97503 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx3-2P97503 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nkx3-2P97503 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.36■□□□□ 0.21
Nkx3-2P97503 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nkx3-2P97503 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nkx3-2P97503 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nkx3-2P97503 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nkx3-2P97503 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Nkx3-2P97503 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nkx3-2P97503 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Nkx3-2P97503 Gm10231-201ENSMUST00000181584 441 ntBASIC16.36■□□□□ 0.21
Nkx3-2P97503 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nkx3-2P97503 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Nkx3-2P97503 Gm10175-202ENSMUST00000208752 441 ntBASIC16.36■□□□□ 0.21
Nkx3-2P97503 Gm4974-201ENSMUST00000209974 875 ntBASIC16.36■□□□□ 0.21
Nkx3-2P97503 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.36■□□□□ 0.21
Nkx3-2P97503 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nkx3-2P97503 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nkx3-2P97503 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nkx3-2P97503 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nkx3-2P97503 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nkx3-2P97503 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nkx3-2P97503 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nkx3-2P97503 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nkx3-2P97503 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nkx3-2P97503 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Nkx3-2P97503 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nkx3-2P97503 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx3-2P97503 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx3-2P97503 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx3-2P97503 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx3-2P97503 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
Nkx3-2P97503 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.35■□□□□ 0.21
Nkx3-2P97503 Gm11539-201ENSMUST00000119837 557 ntBASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms