Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC14.44□□□□□ -0.1
Nkx2-1P50220 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-1P50220 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-1P50220 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-1P50220 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-1P50220 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-1P50220 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-1P50220 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Nkx2-1P50220 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Nkx2-1P50220 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC14.44□□□□□ -0.1
Nkx2-1P50220 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-1P50220 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-1P50220 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-1P50220 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-1P50220 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Nkx2-1P50220 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-1P50220 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-1P50220 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-1P50220 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-1P50220 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Nkx2-1P50220 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC14.43□□□□□ -0.1
Nkx2-1P50220 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Nkx2-1P50220 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC14.43□□□□□ -0.1
Nkx2-1P50220 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-1P50220 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Nkx2-1P50220 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-1P50220 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-1P50220 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-1P50220 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-1P50220 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-1P50220 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-1P50220 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-1P50220 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC14.43□□□□□ -0.1
Nkx2-1P50220 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-1P50220 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.43□□□□□ -0.1
Nkx2-1P50220 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC14.43□□□□□ -0.1
Nkx2-1P50220 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-1P50220 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC14.43□□□□□ -0.1
Nkx2-1P50220 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-1P50220 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC14.42□□□□□ -0.1
Nkx2-1P50220 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx2-1P50220 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx2-1P50220 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx2-1P50220 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx2-1P50220 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx2-1P50220 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC14.42□□□□□ -0.1
Nkx2-1P50220 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
Nkx2-1P50220 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Nkx2-1P50220 Gm9988-201ENSMUST00000069786 435 ntBASIC14.42□□□□□ -0.1
Nkx2-1P50220 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC14.42□□□□□ -0.1
Nkx2-1P50220 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx2-1P50220 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx2-1P50220 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx2-1P50220 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx2-1P50220 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx2-1P50220 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx2-1P50220 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx2-1P50220 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx2-1P50220 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC14.42□□□□□ -0.1
Nkx2-1P50220 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx2-1P50220 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC14.42□□□□□ -0.1
Nkx2-1P50220 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx2-1P50220 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx2-1P50220 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Nkx2-1P50220 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Nkx2-1P50220 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC14.42□□□□□ -0.1
Nkx2-1P50220 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-1P50220 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-1P50220 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.41□□□□□ -0.1
Nkx2-1P50220 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Nkx2-1P50220 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-1P50220 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-1P50220 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC14.41□□□□□ -0.1
Nkx2-1P50220 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-1P50220 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-1P50220 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC14.41□□□□□ -0.1
Nkx2-1P50220 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC14.41□□□□□ -0.1
Nkx2-1P50220 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-1P50220 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-1P50220 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Nkx2-1P50220 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-1P50220 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-1P50220 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-1P50220 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-1P50220 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-1P50220 Gm16401-202ENSMUST00000197463 2074 ntBASIC14.41□□□□□ -0.1
Nkx2-1P50220 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Nkx2-1P50220 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-1P50220 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Nkx2-1P50220 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-1P50220 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.41□□□□□ -0.1
Nkx2-1P50220 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-1P50220 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC14.41□□□□□ -0.1
Nkx2-1P50220 Gm10129-202ENSMUST00000193100 1316 ntBASIC14.41□□□□□ -0.1
Nkx2-1P50220 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-1P50220 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx2-1P50220 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx2-1P50220 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx2-1P50220 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx2-1P50220 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms