Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HADHAP40939 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.29■□□□□ 0.84
HADHAP40939 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.29■□□□□ 0.84
HADHAP40939 AC006970.2-201ENST00000450065 779 ntBASIC20.29■□□□□ 0.84
HADHAP40939 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.29■□□□□ 0.84
HADHAP40939 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.29■□□□□ 0.84
HADHAP40939 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
HADHAP40939 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HADHAP40939 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HADHAP40939 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.29■□□□□ 0.84
HADHAP40939 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.29■□□□□ 0.84
HADHAP40939 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HADHAP40939 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.29■□□□□ 0.84
HADHAP40939 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
HADHAP40939 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
HADHAP40939 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HADHAP40939 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HADHAP40939 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HADHAP40939 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.28■□□□□ 0.84
HADHAP40939 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HADHAP40939 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HADHAP40939 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HADHAP40939 AL391422.3-201ENST00000603791 2761 ntBASIC20.28■□□□□ 0.84
HADHAP40939 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
HADHAP40939 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.28■□□□□ 0.84
HADHAP40939 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.28■□□□□ 0.84
HADHAP40939 AL050303.2-201ENST00000619798 666 ntBASIC20.28■□□□□ 0.84
HADHAP40939 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
HADHAP40939 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
HADHAP40939 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HADHAP40939 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.28■□□□□ 0.84
HADHAP40939 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HADHAP40939 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
HADHAP40939 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HADHAP40939 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
HADHAP40939 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HADHAP40939 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.27■□□□□ 0.84
HADHAP40939 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
HADHAP40939 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.27■□□□□ 0.84
HADHAP40939 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HADHAP40939 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HADHAP40939 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HADHAP40939 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
HADHAP40939 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.27■□□□□ 0.84
HADHAP40939 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
HADHAP40939 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HADHAP40939 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.27■□□□□ 0.84
HADHAP40939 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HADHAP40939 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HADHAP40939 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HADHAP40939 AC093787.1-201ENST00000450396 207 ntBASIC20.27■□□□□ 0.84
HADHAP40939 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.27■□□□□ 0.84
HADHAP40939 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HADHAP40939 AC105036.2-201ENST00000569468 176 ntBASIC20.27■□□□□ 0.84
HADHAP40939 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.27■□□□□ 0.84
HADHAP40939 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HADHAP40939 AL589743.5-201ENST00000616611 1050 ntBASIC20.27■□□□□ 0.84
HADHAP40939 AC105020.6-201ENST00000621523 1217 ntBASIC20.27■□□□□ 0.84
HADHAP40939 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HADHAP40939 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.27■□□□□ 0.84
HADHAP40939 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
HADHAP40939 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
HADHAP40939 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
HADHAP40939 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HADHAP40939 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HADHAP40939 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HADHAP40939 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.26■□□□□ 0.83
HADHAP40939 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HADHAP40939 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.26■□□□□ 0.83
HADHAP40939 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.26■□□□□ 0.83
HADHAP40939 AL121832.2-201ENST00000610979 668 ntBASIC20.26■□□□□ 0.83
HADHAP40939 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
HADHAP40939 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HADHAP40939 MKRN4P-201ENST00000444706 1521 ntBASIC20.26■□□□□ 0.83
HADHAP40939 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HADHAP40939 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HADHAP40939 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
HADHAP40939 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HADHAP40939 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
HADHAP40939 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
HADHAP40939 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
HADHAP40939 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HADHAP40939 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HADHAP40939 TCF3P1-201ENST00000423021 1937 ntBASIC20.25■□□□□ 0.83
HADHAP40939 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.25■□□□□ 0.83
HADHAP40939 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HADHAP40939 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
HADHAP40939 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.25■□□□□ 0.83
HADHAP40939 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HADHAP40939 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
HADHAP40939 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.25■□□□□ 0.83
HADHAP40939 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HADHAP40939 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
HADHAP40939 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
HADHAP40939 ID1-201ENST00000376105 1233 ntBASIC20.25■□□□□ 0.83
HADHAP40939 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.25■□□□□ 0.83
HADHAP40939 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.25■□□□□ 0.83
HADHAP40939 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
HADHAP40939 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HADHAP40939 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms