Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Upk2P38575 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC15.25■□□□□ 0.03
Upk2P38575 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
Upk2P38575 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Upk2P38575 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Upk2P38575 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Upk2P38575 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Upk2P38575 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Upk2P38575 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Upk2P38575 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC15.25■□□□□ 0.03
Upk2P38575 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Upk2P38575 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Upk2P38575 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Upk2P38575 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Upk2P38575 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Upk2P38575 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Upk2P38575 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Upk2P38575 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Upk2P38575 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Upk2P38575 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Upk2P38575 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Upk2P38575 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Upk2P38575 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Upk2P38575 Gm12669-201ENSMUST00000122162 1009 ntBASIC15.24■□□□□ 0.03
Upk2P38575 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Upk2P38575 Gm10653-202ENSMUST00000139570 835 ntBASIC15.24■□□□□ 0.03
Upk2P38575 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC15.24■□□□□ 0.03
Upk2P38575 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Upk2P38575 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC15.24■□□□□ 0.03
Upk2P38575 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC15.24■□□□□ 0.03
Upk2P38575 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC15.24■□□□□ 0.03
Upk2P38575 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Upk2P38575 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Upk2P38575 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Upk2P38575 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Upk2P38575 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Upk2P38575 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Upk2P38575 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Upk2P38575 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Upk2P38575 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Upk2P38575 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Upk2P38575 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Upk2P38575 AC124581.1-201ENSMUST00000225416 1399 ntBASIC15.24■□□□□ 0.03
Upk2P38575 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Upk2P38575 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Upk2P38575 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC15.23■□□□□ 0.03
Upk2P38575 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Upk2P38575 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Upk2P38575 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Upk2P38575 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC15.23■□□□□ 0.03
Upk2P38575 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC15.23■□□□□ 0.03
Upk2P38575 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Upk2P38575 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Upk2P38575 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Upk2P38575 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Upk2P38575 Gm10698-201ENSMUST00000182663 604 ntBASIC15.23■□□□□ 0.03
Upk2P38575 Gm10517-202ENSMUST00000192970 758 ntBASIC15.23■□□□□ 0.03
Upk2P38575 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Upk2P38575 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
Upk2P38575 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Upk2P38575 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Upk2P38575 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Upk2P38575 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC15.22■□□□□ 0.03
Upk2P38575 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Upk2P38575 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC15.22■□□□□ 0.03
Upk2P38575 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Upk2P38575 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Upk2P38575 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC15.22■□□□□ 0.03
Upk2P38575 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Upk2P38575 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Upk2P38575 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Upk2P38575 Gm43338-201ENSMUST00000198617 2223 ntBASIC15.22■□□□□ 0.03
Upk2P38575 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Upk2P38575 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Upk2P38575 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC15.22■□□□□ 0.03
Upk2P38575 AC121598.2-201ENSMUST00000228376 2325 ntBASIC15.22■□□□□ 0.03
Upk2P38575 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Upk2P38575 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Upk2P38575 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Upk2P38575 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Upk2P38575 Gm15635-204ENSMUST00000208024 2539 ntBASIC15.21■□□□□ 0.03
Upk2P38575 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Upk2P38575 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Upk2P38575 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Upk2P38575 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC15.21■□□□□ 0.03
Upk2P38575 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Upk2P38575 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Upk2P38575 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Upk2P38575 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC15.21■□□□□ 0.03
Upk2P38575 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Upk2P38575 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Upk2P38575 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Upk2P38575 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Upk2P38575 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Upk2P38575 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Upk2P38575 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Upk2P38575 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Upk2P38575 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC15.2■□□□□ 0.02
Upk2P38575 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
Upk2P38575 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms