Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HmgclP38060 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HmgclP38060 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HmgclP38060 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HmgclP38060 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HmgclP38060 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HmgclP38060 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HmgclP38060 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HmgclP38060 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HmgclP38060 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
HmgclP38060 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HmgclP38060 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.1■□□□□ 0.33
HmgclP38060 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HmgclP38060 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HmgclP38060 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HmgclP38060 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HmgclP38060 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HmgclP38060 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
HmgclP38060 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HmgclP38060 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HmgclP38060 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HmgclP38060 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
HmgclP38060 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
HmgclP38060 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.09■□□□□ 0.33
HmgclP38060 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HmgclP38060 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HmgclP38060 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
HmgclP38060 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HmgclP38060 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.09■□□□□ 0.33
HmgclP38060 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.09■□□□□ 0.33
HmgclP38060 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.09■□□□□ 0.33
HmgclP38060 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.09■□□□□ 0.33
HmgclP38060 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HmgclP38060 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HmgclP38060 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HmgclP38060 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HmgclP38060 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HmgclP38060 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HmgclP38060 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
HmgclP38060 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
HmgclP38060 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.08■□□□□ 0.32
HmgclP38060 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
HmgclP38060 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HmgclP38060 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HmgclP38060 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HmgclP38060 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HmgclP38060 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
HmgclP38060 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HmgclP38060 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.07■□□□□ 0.32
HmgclP38060 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HmgclP38060 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HmgclP38060 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HmgclP38060 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
HmgclP38060 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
HmgclP38060 Gm715-201ENSMUST00000117865 831 ntBASIC17.07■□□□□ 0.32
HmgclP38060 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.07■□□□□ 0.32
HmgclP38060 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HmgclP38060 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HmgclP38060 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HmgclP38060 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
HmgclP38060 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HmgclP38060 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.07■□□□□ 0.32
HmgclP38060 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HmgclP38060 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HmgclP38060 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HmgclP38060 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
HmgclP38060 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
HmgclP38060 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HmgclP38060 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HmgclP38060 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HmgclP38060 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HmgclP38060 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HmgclP38060 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HmgclP38060 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.06■□□□□ 0.32
HmgclP38060 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.06■□□□□ 0.32
HmgclP38060 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HmgclP38060 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.06■□□□□ 0.32
HmgclP38060 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.06■□□□□ 0.32
HmgclP38060 Gm5297-201ENSMUST00000198555 1171 ntBASIC17.06■□□□□ 0.32
HmgclP38060 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HmgclP38060 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
HmgclP38060 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HmgclP38060 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.06■□□□□ 0.32
HmgclP38060 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HmgclP38060 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HmgclP38060 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HmgclP38060 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
HmgclP38060 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HmgclP38060 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HmgclP38060 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HmgclP38060 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HmgclP38060 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
HmgclP38060 Gm12085-201ENSMUST00000119263 940 ntBASIC17.05■□□□□ 0.32
HmgclP38060 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HmgclP38060 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.05■□□□□ 0.32
HmgclP38060 Gm37025-201ENSMUST00000195159 829 ntBASIC17.05■□□□□ 0.32
HmgclP38060 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.05■□□□□ 0.32
HmgclP38060 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
HmgclP38060 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.05■□□□□ 0.32
HmgclP38060 Timm23-208ENSMUST00000226683 750 ntBASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms