Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smim1P0C8K7 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smim1P0C8K7 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC12.01□□□□□ -0.49
Smim1P0C8K7 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smim1P0C8K7 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smim1P0C8K7 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smim1P0C8K7 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Smim1P0C8K7 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smim1P0C8K7 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smim1P0C8K7 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smim1P0C8K7 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Smim1P0C8K7 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smim1P0C8K7 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smim1P0C8K7 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Smim1P0C8K7 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smim1P0C8K7 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smim1P0C8K7 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Smim1P0C8K7 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smim1P0C8K7 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC12□□□□□ -0.49
Smim1P0C8K7 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smim1P0C8K7 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Smim1P0C8K7 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smim1P0C8K7 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC12□□□□□ -0.49
Smim1P0C8K7 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC12□□□□□ -0.49
Smim1P0C8K7 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC12□□□□□ -0.49
Smim1P0C8K7 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smim1P0C8K7 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Smim1P0C8K7 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smim1P0C8K7 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC12□□□□□ -0.49
Smim1P0C8K7 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC12□□□□□ -0.49
Smim1P0C8K7 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smim1P0C8K7 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC12□□□□□ -0.49
Smim1P0C8K7 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Smim1P0C8K7 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC12□□□□□ -0.49
Smim1P0C8K7 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Smim1P0C8K7 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smim1P0C8K7 Gm10209-201ENSMUST00000203397 1607 ntBASIC12□□□□□ -0.49
Smim1P0C8K7 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC12□□□□□ -0.49
Smim1P0C8K7 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Smim1P0C8K7 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC12□□□□□ -0.49
Smim1P0C8K7 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smim1P0C8K7 Gm45212-201ENSMUST00000205831 3403 ntBASIC11.99□□□□□ -0.49
Smim1P0C8K7 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Smim1P0C8K7 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
Smim1P0C8K7 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Smim1P0C8K7 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Smim1P0C8K7 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smim1P0C8K7 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Smim1P0C8K7 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smim1P0C8K7 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smim1P0C8K7 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smim1P0C8K7 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smim1P0C8K7 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smim1P0C8K7 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC11.99□□□□□ -0.49
Smim1P0C8K7 Gm27032-201ENSMUST00000183124 1116 ntBASIC11.99□□□□□ -0.49
Smim1P0C8K7 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Smim1P0C8K7 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Smim1P0C8K7 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC11.99□□□□□ -0.49
Smim1P0C8K7 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smim1P0C8K7 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC11.99□□□□□ -0.49
Smim1P0C8K7 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smim1P0C8K7 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smim1P0C8K7 AC125311.2-201ENSMUST00000227477 1940 ntBASIC11.99□□□□□ -0.49
Smim1P0C8K7 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smim1P0C8K7 Gm16499-203ENSMUST00000204633 2177 ntBASIC11.99□□□□□ -0.49
Smim1P0C8K7 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smim1P0C8K7 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smim1P0C8K7 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Smim1P0C8K7 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smim1P0C8K7 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smim1P0C8K7 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Smim1P0C8K7 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smim1P0C8K7 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smim1P0C8K7 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Smim1P0C8K7 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smim1P0C8K7 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smim1P0C8K7 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Smim1P0C8K7 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Smim1P0C8K7 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smim1P0C8K7 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smim1P0C8K7 AC093043.3-201ENSMUST00000226531 2273 ntBASIC11.98□□□□□ -0.49
Smim1P0C8K7 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smim1P0C8K7 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Smim1P0C8K7 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Smim1P0C8K7 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smim1P0C8K7 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Smim1P0C8K7 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC11.98□□□□□ -0.49
Smim1P0C8K7 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smim1P0C8K7 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Smim1P0C8K7 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smim1P0C8K7 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smim1P0C8K7 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Smim1P0C8K7 Gm36858-201ENSMUST00000194501 2391 ntBASIC11.98□□□□□ -0.49
Smim1P0C8K7 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Smim1P0C8K7 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC11.98□□□□□ -0.49
Smim1P0C8K7 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smim1P0C8K7 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smim1P0C8K7 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC11.97□□□□□ -0.49
Smim1P0C8K7 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smim1P0C8K7 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms