Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
Hoxa4P06798 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hoxa4P06798 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.08■□□□□ 0.32
Hoxa4P06798 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.08■□□□□ 0.32
Hoxa4P06798 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Hoxa4P06798 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Hoxa4P06798 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Hoxa4P06798 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hoxa4P06798 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hoxa4P06798 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hoxa4P06798 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hoxa4P06798 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Hoxa4P06798 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
Hoxa4P06798 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hoxa4P06798 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hoxa4P06798 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hoxa4P06798 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hoxa4P06798 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hoxa4P06798 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Hoxa4P06798 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.07■□□□□ 0.32
Hoxa4P06798 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hoxa4P06798 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hoxa4P06798 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hoxa4P06798 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Hoxa4P06798 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.07■□□□□ 0.32
Hoxa4P06798 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hoxa4P06798 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Hoxa4P06798 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hoxa4P06798 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hoxa4P06798 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hoxa4P06798 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hoxa4P06798 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hoxa4P06798 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hoxa4P06798 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hoxa4P06798 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.06■□□□□ 0.32
Hoxa4P06798 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Hoxa4P06798 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Hoxa4P06798 Gm2274-201ENSMUST00000184539 609 ntBASIC17.06■□□□□ 0.32
Hoxa4P06798 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.06■□□□□ 0.32
Hoxa4P06798 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hoxa4P06798 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hoxa4P06798 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Hoxa4P06798 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.06■□□□□ 0.32
Hoxa4P06798 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hoxa4P06798 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hoxa4P06798 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxa4P06798 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxa4P06798 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxa4P06798 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.05■□□□□ 0.32
Hoxa4P06798 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxa4P06798 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Hoxa4P06798 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Hoxa4P06798 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxa4P06798 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxa4P06798 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxa4P06798 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxa4P06798 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.05■□□□□ 0.32
Hoxa4P06798 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxa4P06798 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxa4P06798 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.05■□□□□ 0.32
Hoxa4P06798 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
Hoxa4P06798 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxa4P06798 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.05■□□□□ 0.32
Hoxa4P06798 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Hoxa4P06798 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxa4P06798 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxa4P06798 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxa4P06798 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxa4P06798 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxa4P06798 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Hoxa4P06798 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Hoxa4P06798 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.04■□□□□ 0.32
Hoxa4P06798 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxa4P06798 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
Hoxa4P06798 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.04■□□□□ 0.32
Hoxa4P06798 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxa4P06798 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxa4P06798 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxa4P06798 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxa4P06798 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Hoxa4P06798 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxa4P06798 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Hoxa4P06798 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.04■□□□□ 0.32
Hoxa4P06798 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxa4P06798 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxa4P06798 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hoxa4P06798 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hoxa4P06798 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.03■□□□□ 0.32
Hoxa4P06798 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.03■□□□□ 0.32
Hoxa4P06798 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hoxa4P06798 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Hoxa4P06798 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hoxa4P06798 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hoxa4P06798 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.03■□□□□ 0.32
Hoxa4P06798 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.03■□□□□ 0.32
Hoxa4P06798 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hoxa4P06798 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Hoxa4P06798 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hoxa4P06798 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hoxa4P06798 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms