Protein–RNA interactions for Protein: F6SW83

Gm10477, Predicted gene 10477, mousemouse

Predictions only

Length 55 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10477F6SW83 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm10477F6SW83 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm10477F6SW83 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.15■□□□□ 0.18
Gm10477F6SW83 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm10477F6SW83 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm10477F6SW83 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm10477F6SW83 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm10477F6SW83 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm10477F6SW83 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm10477F6SW83 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Gm10477F6SW83 Gm42501-201ENSMUST00000200220 1026 ntBASIC16.15■□□□□ 0.18
Gm10477F6SW83 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Gm10477F6SW83 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm10477F6SW83 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm10477F6SW83 Gm5576-201ENSMUST00000075809 1236 ntBASIC16.15■□□□□ 0.18
Gm10477F6SW83 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm10477F6SW83 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm10477F6SW83 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm10477F6SW83 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Gm10477F6SW83 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.15■□□□□ 0.18
Gm10477F6SW83 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm10477F6SW83 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm10477F6SW83 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Gm10477F6SW83 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm10477F6SW83 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm10477F6SW83 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm10477F6SW83 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.15■□□□□ 0.18
Gm10477F6SW83 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.18
Gm10477F6SW83 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm10477F6SW83 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm10477F6SW83 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm10477F6SW83 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Gm10477F6SW83 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Gm10477F6SW83 Gm7160-202ENSMUST00000188519 1027 ntBASIC16.14■□□□□ 0.17
Gm10477F6SW83 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm10477F6SW83 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm10477F6SW83 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Gm10477F6SW83 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Gm10477F6SW83 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm10477F6SW83 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm10477F6SW83 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Gm10477F6SW83 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Gm10477F6SW83 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm10477F6SW83 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.13■□□□□ 0.17
Gm10477F6SW83 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm10477F6SW83 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm10477F6SW83 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm10477F6SW83 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm10477F6SW83 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
Gm10477F6SW83 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Gm10477F6SW83 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm10477F6SW83 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Gm10477F6SW83 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm10477F6SW83 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm10477F6SW83 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Gm10477F6SW83 Gm11421-201ENSMUST00000122124 294 ntBASIC16.13■□□□□ 0.17
Gm10477F6SW83 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC16.13■□□□□ 0.17
Gm10477F6SW83 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Gm10477F6SW83 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm10477F6SW83 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Gm10477F6SW83 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.13■□□□□ 0.17
Gm10477F6SW83 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Gm10477F6SW83 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.13■□□□□ 0.17
Gm10477F6SW83 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.13■□□□□ 0.17
Gm10477F6SW83 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.13■□□□□ 0.17
Gm10477F6SW83 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.13■□□□□ 0.17
Gm10477F6SW83 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm10477F6SW83 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.13■□□□□ 0.17
Gm10477F6SW83 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Gm10477F6SW83 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Gm10477F6SW83 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm10477F6SW83 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.12■□□□□ 0.17
Gm10477F6SW83 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Gm10477F6SW83 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm10477F6SW83 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Gm10477F6SW83 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.12■□□□□ 0.17
Gm10477F6SW83 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm10477F6SW83 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm10477F6SW83 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm10477F6SW83 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm10477F6SW83 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Gm10477F6SW83 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm10477F6SW83 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Gm10477F6SW83 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm10477F6SW83 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Gm10477F6SW83 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Gm10477F6SW83 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm10477F6SW83 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm10477F6SW83 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm10477F6SW83 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Gm10477F6SW83 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Gm10477F6SW83 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm10477F6SW83 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Gm10477F6SW83 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.11■□□□□ 0.17
Gm10477F6SW83 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm10477F6SW83 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm10477F6SW83 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm10477F6SW83 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm10477F6SW83 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Gm10477F6SW83 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms