Protein–RNA interactions for Protein: A0A0B4J1G7

Trbv1, T cell receptor beta, variable 1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv1A0A0B4J1G7 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv1A0A0B4J1G7 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC13.64□□□□□ -0.23
Trbv1A0A0B4J1G7 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC13.64□□□□□ -0.23
Trbv1A0A0B4J1G7 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv1A0A0B4J1G7 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv1A0A0B4J1G7 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Trbv1A0A0B4J1G7 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv1A0A0B4J1G7 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv1A0A0B4J1G7 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC13.64□□□□□ -0.23
Trbv1A0A0B4J1G7 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv1A0A0B4J1G7 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv1A0A0B4J1G7 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv1A0A0B4J1G7 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv1A0A0B4J1G7 Gm16401-202ENSMUST00000197463 2074 ntBASIC13.64□□□□□ -0.23
Trbv1A0A0B4J1G7 Gm10655-201ENSMUST00000098658 1397 ntBASIC13.64□□□□□ -0.23
Trbv1A0A0B4J1G7 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv1A0A0B4J1G7 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC13.64□□□□□ -0.23
Trbv1A0A0B4J1G7 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC13.64□□□□□ -0.23
Trbv1A0A0B4J1G7 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
Trbv1A0A0B4J1G7 Ap3s1-204ENSMUST00000225520 957 ntBASIC13.64□□□□□ -0.23
Trbv1A0A0B4J1G7 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Trbv1A0A0B4J1G7 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv1A0A0B4J1G7 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv1A0A0B4J1G7 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv1A0A0B4J1G7 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv1A0A0B4J1G7 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv1A0A0B4J1G7 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC13.64□□□□□ -0.23
Trbv1A0A0B4J1G7 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC13.64□□□□□ -0.23
Trbv1A0A0B4J1G7 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv1A0A0B4J1G7 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv1A0A0B4J1G7 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv1A0A0B4J1G7 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv1A0A0B4J1G7 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC13.63□□□□□ -0.23
Trbv1A0A0B4J1G7 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv1A0A0B4J1G7 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv1A0A0B4J1G7 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Trbv1A0A0B4J1G7 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv1A0A0B4J1G7 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv1A0A0B4J1G7 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv1A0A0B4J1G7 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv1A0A0B4J1G7 Gm37805-201ENSMUST00000192612 1094 ntBASIC13.63□□□□□ -0.23
Trbv1A0A0B4J1G7 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv1A0A0B4J1G7 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv1A0A0B4J1G7 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv1A0A0B4J1G7 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC13.63□□□□□ -0.23
Trbv1A0A0B4J1G7 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv1A0A0B4J1G7 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv1A0A0B4J1G7 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trbv1A0A0B4J1G7 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv1A0A0B4J1G7 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv1A0A0B4J1G7 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
Trbv1A0A0B4J1G7 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv1A0A0B4J1G7 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv1A0A0B4J1G7 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv1A0A0B4J1G7 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Trbv1A0A0B4J1G7 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv1A0A0B4J1G7 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv1A0A0B4J1G7 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trbv1A0A0B4J1G7 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv1A0A0B4J1G7 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv1A0A0B4J1G7 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv1A0A0B4J1G7 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv1A0A0B4J1G7 Gm42569-201ENSMUST00000200539 472 ntBASIC13.62□□□□□ -0.23
Trbv1A0A0B4J1G7 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv1A0A0B4J1G7 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv1A0A0B4J1G7 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv1A0A0B4J1G7 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv1A0A0B4J1G7 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv1A0A0B4J1G7 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trbv1A0A0B4J1G7 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv1A0A0B4J1G7 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv1A0A0B4J1G7 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC13.62□□□□□ -0.23
Trbv1A0A0B4J1G7 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv1A0A0B4J1G7 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv1A0A0B4J1G7 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Trbv1A0A0B4J1G7 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Trbv1A0A0B4J1G7 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC13.61□□□□□ -0.23
Trbv1A0A0B4J1G7 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
Trbv1A0A0B4J1G7 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv1A0A0B4J1G7 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv1A0A0B4J1G7 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv1A0A0B4J1G7 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC13.61□□□□□ -0.23
Trbv1A0A0B4J1G7 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv1A0A0B4J1G7 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv1A0A0B4J1G7 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Trbv1A0A0B4J1G7 Gm26971-201ENSMUST00000182423 1072 ntBASIC13.61□□□□□ -0.23
Trbv1A0A0B4J1G7 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv1A0A0B4J1G7 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv1A0A0B4J1G7 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv1A0A0B4J1G7 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv1A0A0B4J1G7 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv1A0A0B4J1G7 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv1A0A0B4J1G7 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv1A0A0B4J1G7 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC13.61□□□□□ -0.23
Trbv1A0A0B4J1G7 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv1A0A0B4J1G7 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv1A0A0B4J1G7 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv1A0A0B4J1G7 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv1A0A0B4J1G7 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv1A0A0B4J1G7 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms