Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AC097263.1-201ENST00000496795 606 ntBASIC6.95□□□□□ -1.3
C9orf40Q8IXQ3 NPY6R-201ENST00000503807 1112 ntBASIC6.95□□□□□ -1.3
C9orf40Q8IXQ3 TNFRSF10A-AS1-201ENST00000518308 637 ntTSL 3 BASIC6.95□□□□□ -1.3
C9orf40Q8IXQ3 AP000880.1-202ENST00000526487 588 ntTSL 3 BASIC6.95□□□□□ -1.3
C9orf40Q8IXQ3 AC084880.4-201ENST00000538405 577 ntTSL 2 BASIC6.95□□□□□ -1.3
C9orf40Q8IXQ3 IGHV1OR15-3-201ENST00000564926 351 ntBASIC6.95□□□□□ -1.3
C9orf40Q8IXQ3 AC012181.2-201ENST00000570210 699 ntBASIC6.95□□□□□ -1.3
C9orf40Q8IXQ3 AC087292.1-201ENST00000573371 512 ntTSL 5 BASIC6.95□□□□□ -1.3
C9orf40Q8IXQ3 TTN-AS1-215ENST00000585451 949 ntTSL 5 BASIC6.95□□□□□ -1.3
C9orf40Q8IXQ3 LINC01837-204ENST00000593211 570 ntTSL 4 BASIC6.95□□□□□ -1.3
C9orf40Q8IXQ3 AC010618.2-201ENST00000596192 460 ntTSL 3 BASIC6.95□□□□□ -1.3
C9orf40Q8IXQ3 HNRNPA1P67-201ENST00000604027 926 ntBASIC6.95□□□□□ -1.3
C9orf40Q8IXQ3 AC008385.1-201ENST00000604421 355 ntBASIC6.95□□□□□ -1.3
C9orf40Q8IXQ3 CUX2P1-201ENST00000606426 298 ntBASIC6.95□□□□□ -1.3
C9orf40Q8IXQ3 AL589743.4-201ENST00000610763 586 ntTSL 5 BASIC6.95□□□□□ -1.3
C9orf40Q8IXQ3 OR4M2-201ENST00000614722 1133 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
C9orf40Q8IXQ3 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC6.95□□□□□ -1.3
C9orf40Q8IXQ3 METAP1-212ENST00000625963 147 ntTSL 5 BASIC6.95□□□□□ -1.3
C9orf40Q8IXQ3 TTN-AS1-265ENST00000627661 806 ntTSL 5 BASIC6.95□□□□□ -1.3
C9orf40Q8IXQ3 SNORA43.5-201ENST00000631270 138 ntBASIC6.95□□□□□ -1.3
C9orf40Q8IXQ3 DCAF5-205ENST00000554215 4803 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
C9orf40Q8IXQ3 AKT3-202ENST00000336199 1688 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
C9orf40Q8IXQ3 CS-212ENST00000548567 3057 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
C9orf40Q8IXQ3 PKP4-AS1-201ENST00000342892 4067 ntTSL 2 BASIC6.95□□□□□ -1.3
C9orf40Q8IXQ3 AL591379.1-201ENST00000315293 3739 ntTSL 2 BASIC6.95□□□□□ -1.3
C9orf40Q8IXQ3 MS4A2-204ENST00000617306 3512 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
C9orf40Q8IXQ3 CXCR2P1-201ENST00000439871 2503 ntTSL 3 BASIC6.95□□□□□ -1.3
C9orf40Q8IXQ3 EPYC-201ENST00000261172 1539 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
C9orf40Q8IXQ3 TPD52-204ENST00000517427 2596 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
C9orf40Q8IXQ3 PDE4DIP-203ENST00000369349 4677 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
C9orf40Q8IXQ3 NAV2-216ENST00000540292 11003 ntAPPRIS ALT1 TSL 5 BASIC6.95□□□□□ -1.3
C9orf40Q8IXQ3 ESRP1-204ENST00000454170 3482 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
C9orf40Q8IXQ3 CELF2-203ENST00000416382 6894 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
C9orf40Q8IXQ3 C1S-205ENST00000406697 3076 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
C9orf40Q8IXQ3 ZRANB1-201ENST00000359653 5695 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
C9orf40Q8IXQ3 CDADC1-201ENST00000251108 3386 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
C9orf40Q8IXQ3 HYKK-205ENST00000566332 1422 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
C9orf40Q8IXQ3 SLC6A16-202ENST00000454748 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
C9orf40Q8IXQ3 SLC22A9-201ENST00000279178 2343 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
C9orf40Q8IXQ3 PPP6C-201ENST00000373547 4118 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
C9orf40Q8IXQ3 NLGN4X-201ENST00000275857 5454 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
C9orf40Q8IXQ3 FLJ21408-201ENST00000499939 2594 ntTSL 2 BASIC6.94□□□□□ -1.3
C9orf40Q8IXQ3 AL078621.1-201ENST00000272567 768 ntBASIC6.94□□□□□ -1.3
C9orf40Q8IXQ3 OR51H1-201ENST00000322059 999 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
C9orf40Q8IXQ3 MIR575-201ENST00000385013 94 ntBASIC6.94□□□□□ -1.3
C9orf40Q8IXQ3 IGLJ2-201ENST00000390322 175 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
C9orf40Q8IXQ3 NDUFV2-202ENST00000400033 942 ntTSL 3 BASIC6.94□□□□□ -1.3
C9orf40Q8IXQ3 AL139806.1-201ENST00000403057 1002 ntBASIC6.94□□□□□ -1.3
C9orf40Q8IXQ3 AC096570.1-201ENST00000419013 569 ntTSL 4 BASIC6.94□□□□□ -1.3
C9orf40Q8IXQ3 RAC1P4-201ENST00000419413 579 ntBASIC6.94□□□□□ -1.3
C9orf40Q8IXQ3 AL109924.2-201ENST00000419800 934 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
C9orf40Q8IXQ3 AC093107.1-201ENST00000422772 609 ntBASIC6.94□□□□□ -1.3
C9orf40Q8IXQ3 AL591846.2-201ENST00000425161 358 ntTSL 2 BASIC6.94□□□□□ -1.3
C9orf40Q8IXQ3 RPL6P2-201ENST00000425480 783 ntBASIC6.94□□□□□ -1.3
C9orf40Q8IXQ3 AC002066.1-202ENST00000439070 699 ntTSL 3 BASIC6.94□□□□□ -1.3
C9orf40Q8IXQ3 TULP3P1-201ENST00000442322 816 ntTSL 3 BASIC6.94□□□□□ -1.3
C9orf40Q8IXQ3 AP000534.1-201ENST00000444162 1294 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
C9orf40Q8IXQ3 AL451074.4-201ENST00000447545 470 ntBASIC6.94□□□□□ -1.3
C9orf40Q8IXQ3 ZNF385D-AS2-202ENST00000448980 370 ntTSL 3 BASIC6.94□□□□□ -1.3
C9orf40Q8IXQ3 LINC02556-201ENST00000450776 346 ntTSL 3 BASIC6.94□□□□□ -1.3
C9orf40Q8IXQ3 CARD8-214ENST00000520007 614 ntTSL 2 BASIC6.94□□□□□ -1.3
C9orf40Q8IXQ3 AP001922.2-201ENST00000530435 390 ntTSL 3 BASIC6.94□□□□□ -1.3
C9orf40Q8IXQ3 COX6CP11-201ENST00000555293 229 ntBASIC6.94□□□□□ -1.3
C9orf40Q8IXQ3 UBE2CP1-201ENST00000557130 554 ntBASIC6.94□□□□□ -1.3
C9orf40Q8IXQ3 AC099518.1-201ENST00000568032 841 ntTSL 3 BASIC6.94□□□□□ -1.3
C9orf40Q8IXQ3 RBM4-213ENST00000578778 582 ntTSL 4 BASIC6.94□□□□□ -1.3
C9orf40Q8IXQ3 AC021506.1-201ENST00000581971 597 ntTSL 5 BASIC6.94□□□□□ -1.3
C9orf40Q8IXQ3 AP005131.5-201ENST00000585817 498 ntTSL 3 BASIC6.94□□□□□ -1.3
C9orf40Q8IXQ3 SSX2B-202ENST00000596480 1291 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
C9orf40Q8IXQ3 MIR205HG-210ENST00000603283 455 ntTSL 3 BASIC6.94□□□□□ -1.3
C9orf40Q8IXQ3 AC108451.2-201ENST00000603875 538 ntBASIC6.94□□□□□ -1.3
C9orf40Q8IXQ3 FAM27E3-202ENST00000614611 340 ntBASIC6.94□□□□□ -1.3
C9orf40Q8IXQ3 AC243830.2-201ENST00000618067 630 ntBASIC6.94□□□□□ -1.3
C9orf40Q8IXQ3 AC087893.2-201ENST00000623272 255 ntBASIC6.94□□□□□ -1.3
C9orf40Q8IXQ3 AC022167.5-202ENST00000637237 701 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
C9orf40Q8IXQ3 ASCC1-201ENST00000317126 1501 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
C9orf40Q8IXQ3 KIAA1324L-203ENST00000416314 3179 ntAPPRIS P3 TSL 2 BASIC6.94□□□□□ -1.3
C9orf40Q8IXQ3 MAPK10-333ENST00000641607 2481 ntBASIC6.94□□□□□ -1.3
C9orf40Q8IXQ3 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC6.94□□□□□ -1.3
C9orf40Q8IXQ3 ALG13-201ENST00000251943 3997 ntTSL 2 BASIC6.94□□□□□ -1.3
C9orf40Q8IXQ3 VMA21-201ENST00000330374 4717 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
C9orf40Q8IXQ3 GPR1-203ENST00000437420 1557 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
C9orf40Q8IXQ3 AC242022.1-201ENST00000638002 1565 ntTSL 5 BASIC6.94□□□□□ -1.3
C9orf40Q8IXQ3 FAM217B-202ENST00000360816 5036 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
C9orf40Q8IXQ3 ERG-208ENST00000417133 5023 ntAPPRIS ALT1 TSL 2 BASIC6.94□□□□□ -1.3
C9orf40Q8IXQ3 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
C9orf40Q8IXQ3 MAPK10-371ENST00000641952 5209 ntBASIC6.94□□□□□ -1.3
C9orf40Q8IXQ3 KIF1B-201ENST00000263934 6816 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
C9orf40Q8IXQ3 PABPC5-201ENST00000312600 3221 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
C9orf40Q8IXQ3 ADAM7-203ENST00000441335 1417 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
C9orf40Q8IXQ3 NUMB-231ENST00000559312 1439 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
C9orf40Q8IXQ3 KIFAP3-203ENST00000367767 2718 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
C9orf40Q8IXQ3 SLC16A4-210ENST00000541986 2496 ntTSL 2 BASIC6.93□□□□□ -1.3
C9orf40Q8IXQ3 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
C9orf40Q8IXQ3 DTNA-205ENST00000399113 2232 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
C9orf40Q8IXQ3 AC100810.3-201ENST00000633189 2240 ntBASIC6.93□□□□□ -1.3
C9orf40Q8IXQ3 CD46-201ENST00000322875 3278 ntAPPRIS P4 TSL 1 (best) BASIC6.93□□□□□ -1.3
C9orf40Q8IXQ3 CD46-207ENST00000367041 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
C9orf40Q8IXQ3 HDAC9-201ENST00000401921 3254 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
C9orf40Q8IXQ3 ZNF611-202ENST00000453741 4380 ntTSL 4 BASIC6.93□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms