Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Arhgap12-202ENSMUST00000077128 4431 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Trim47Q8C0E3 A730081D07Rik-201ENSMUST00000153685 1804 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Trim47Q8C0E3 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
Trim47Q8C0E3 Tet2-201ENSMUST00000098603 9179 ntAPPRIS P3 TSL 5 BASIC6.22□□□□□ -1.41
Trim47Q8C0E3 AC162936.1-201ENSMUST00000223676 2368 ntBASIC6.22□□□□□ -1.41
Trim47Q8C0E3 Iigp1-202ENSMUST00000066912 2938 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Trim47Q8C0E3 Ano5-202ENSMUST00000207044 3311 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Trim47Q8C0E3 Mtus1-203ENSMUST00000093534 4148 ntAPPRIS P4 TSL 1 (best) BASIC6.22□□□□□ -1.41
Trim47Q8C0E3 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Trim47Q8C0E3 Clec4a2-202ENSMUST00000041779 2481 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.41
Trim47Q8C0E3 Gm38375-201ENSMUST00000194610 2227 ntBASIC6.21□□□□□ -1.42
Trim47Q8C0E3 Cdc27-201ENSMUST00000093923 5425 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Trim47Q8C0E3 Tom1l1-204ENSMUST00000107869 1826 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Trim47Q8C0E3 Gp6-202ENSMUST00000206928 5900 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Trim47Q8C0E3 Gria4-204ENSMUST00000212533 5207 ntAPPRIS ALT1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Trim47Q8C0E3 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Trim47Q8C0E3 Gm24230-201ENSMUST00000104313 129 ntBASIC6.21□□□□□ -1.42
Trim47Q8C0E3 Gm15526-201ENSMUST00000112504 204 ntBASIC6.21□□□□□ -1.42
Trim47Q8C0E3 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC6.21□□□□□ -1.42
Trim47Q8C0E3 Gm12255-201ENSMUST00000117184 284 ntBASIC6.21□□□□□ -1.42
Trim47Q8C0E3 Gm16089-201ENSMUST00000117679 336 ntBASIC6.21□□□□□ -1.42
Trim47Q8C0E3 Gm11826-201ENSMUST00000118781 438 ntBASIC6.21□□□□□ -1.42
Trim47Q8C0E3 Gm14267-201ENSMUST00000119751 496 ntBASIC6.21□□□□□ -1.42
Trim47Q8C0E3 Mup-ps19-201ENSMUST00000120390 519 ntBASIC6.21□□□□□ -1.42
Trim47Q8C0E3 Gm15223-201ENSMUST00000120989 826 ntBASIC6.21□□□□□ -1.42
Trim47Q8C0E3 Gm23211-201ENSMUST00000122717 308 ntBASIC6.21□□□□□ -1.42
Trim47Q8C0E3 Gm25291-201ENSMUST00000122795 144 ntBASIC6.21□□□□□ -1.42
Trim47Q8C0E3 Gm14302-201ENSMUST00000122806 382 ntTSL 3 BASIC6.21□□□□□ -1.42
Trim47Q8C0E3 Tnfsf13os-202ENSMUST00000144033 578 ntTSL 5 BASIC6.21□□□□□ -1.42
Trim47Q8C0E3 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC6.21□□□□□ -1.42
Trim47Q8C0E3 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Trim47Q8C0E3 Gm17162-201ENSMUST00000168538 473 ntBASIC6.21□□□□□ -1.42
Trim47Q8C0E3 Mir3110-201ENSMUST00000175053 80 ntBASIC6.21□□□□□ -1.42
Trim47Q8C0E3 Gm23872-201ENSMUST00000175432 77 ntBASIC6.21□□□□□ -1.42
Trim47Q8C0E3 Gm25412-201ENSMUST00000180258 107 ntBASIC6.21□□□□□ -1.42
Trim47Q8C0E3 Gm26537-201ENSMUST00000181474 652 ntTSL 3 BASIC6.21□□□□□ -1.42
Trim47Q8C0E3 Mir6903-201ENSMUST00000183597 88 ntBASIC6.21□□□□□ -1.42
Trim47Q8C0E3 Gm27355-201ENSMUST00000185045 128 ntBASIC6.21□□□□□ -1.42
Trim47Q8C0E3 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC6.21□□□□□ -1.42
Trim47Q8C0E3 Gm7871-201ENSMUST00000195346 618 ntBASIC6.21□□□□□ -1.42
Trim47Q8C0E3 Tprkb-208ENSMUST00000200680 814 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
Trim47Q8C0E3 Gm18854-201ENSMUST00000211196 329 ntBASIC6.21□□□□□ -1.42
Trim47Q8C0E3 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC6.21□□□□□ -1.42
Trim47Q8C0E3 Gm7034-201ENSMUST00000218638 645 ntBASIC6.21□□□□□ -1.42
Trim47Q8C0E3 Gm19326-201ENSMUST00000219818 326 ntBASIC6.21□□□□□ -1.42
Trim47Q8C0E3 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC6.21□□□□□ -1.42
Trim47Q8C0E3 AC144819.1-201ENSMUST00000227015 620 ntBASIC6.21□□□□□ -1.42
Trim47Q8C0E3 Olfr1022-201ENSMUST00000054736 948 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Trim47Q8C0E3 Gm2710-201ENSMUST00000073196 603 ntBASIC6.21□□□□□ -1.42
Trim47Q8C0E3 n-R5s46-201ENSMUST00000083960 116 ntBASIC6.21□□□□□ -1.42
Trim47Q8C0E3 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
Trim47Q8C0E3 Trim6-201ENSMUST00000098180 3827 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Trim47Q8C0E3 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Trim47Q8C0E3 Olfr670-202ENSMUST00000214216 3729 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Trim47Q8C0E3 Syt14-205ENSMUST00000215093 9274 ntTSL 5 BASIC6.21□□□□□ -1.42
Trim47Q8C0E3 AC124516.3-201ENSMUST00000221302 3613 ntBASIC6.21□□□□□ -1.42
Trim47Q8C0E3 Gm42492-201ENSMUST00000195780 2915 ntBASIC6.21□□□□□ -1.42
Trim47Q8C0E3 Clk1-201ENSMUST00000034868 1796 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Trim47Q8C0E3 Tbl1xr1-201ENSMUST00000063988 6667 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Trim47Q8C0E3 Vmn1r6-202ENSMUST00000226689 8453 ntAPPRIS P2 BASIC6.21□□□□□ -1.42
Trim47Q8C0E3 Gm38036-201ENSMUST00000194586 3564 ntBASIC6.21□□□□□ -1.42
Trim47Q8C0E3 Gm4070-201ENSMUST00000106766 8795 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Trim47Q8C0E3 Gvin1-201ENSMUST00000006667 8795 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Trim47Q8C0E3 Olfr1173-201ENSMUST00000099830 2268 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Trim47Q8C0E3 Gcnt1-201ENSMUST00000169897 4594 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
Trim47Q8C0E3 Il22ra2-201ENSMUST00000036564 2498 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Trim47Q8C0E3 AC151831.1-201ENSMUST00000227609 4033 ntBASIC6.2□□□□□ -1.42
Trim47Q8C0E3 AC125532.1-201ENSMUST00000216210 2334 ntBASIC6.2□□□□□ -1.42
Trim47Q8C0E3 Rc3h2-202ENSMUST00000112934 8948 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Trim47Q8C0E3 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Trim47Q8C0E3 AC137871.4-201ENSMUST00000226323 3901 ntBASIC6.2□□□□□ -1.42
Trim47Q8C0E3 Gm1966-201ENSMUST00000184540 7293 ntBASIC6.2□□□□□ -1.42
Trim47Q8C0E3 Mmp1b-201ENSMUST00000047888 1449 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Trim47Q8C0E3 Wap-201ENSMUST00000102910 551 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Trim47Q8C0E3 Gm11270-201ENSMUST00000117685 471 ntBASIC6.2□□□□□ -1.42
Trim47Q8C0E3 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC6.2□□□□□ -1.42
Trim47Q8C0E3 Gm14011-201ENSMUST00000145178 302 ntTSL 2 BASIC6.2□□□□□ -1.42
Trim47Q8C0E3 Gm22037-201ENSMUST00000157280 296 ntBASIC6.2□□□□□ -1.42
Trim47Q8C0E3 Gm25920-201ENSMUST00000158307 99 ntBASIC6.2□□□□□ -1.42
Trim47Q8C0E3 Gm22852-201ENSMUST00000177899 101 ntBASIC6.2□□□□□ -1.42
Trim47Q8C0E3 Gm29397-201ENSMUST00000185205 333 ntBASIC6.2□□□□□ -1.42
Trim47Q8C0E3 Gm28094-201ENSMUST00000185262 390 ntBASIC6.2□□□□□ -1.42
Trim47Q8C0E3 Gm28943-201ENSMUST00000186187 615 ntBASIC6.2□□□□□ -1.42
Trim47Q8C0E3 Gm28736-201ENSMUST00000186257 615 ntBASIC6.2□□□□□ -1.42
Trim47Q8C0E3 Gm29401-201ENSMUST00000186690 615 ntBASIC6.2□□□□□ -1.42
Trim47Q8C0E3 Gm29178-204ENSMUST00000186784 615 ntBASIC6.2□□□□□ -1.42
Trim47Q8C0E3 Gm28589-201ENSMUST00000186991 615 ntBASIC6.2□□□□□ -1.42
Trim47Q8C0E3 Gm28936-201ENSMUST00000187153 615 ntBASIC6.2□□□□□ -1.42
Trim47Q8C0E3 Gm29121-201ENSMUST00000187611 615 ntBASIC6.2□□□□□ -1.42
Trim47Q8C0E3 Gm28243-201ENSMUST00000187801 615 ntBASIC6.2□□□□□ -1.42
Trim47Q8C0E3 Gm28844-202ENSMUST00000187977 615 ntBASIC6.2□□□□□ -1.42
Trim47Q8C0E3 Gm29058-201ENSMUST00000189510 615 ntBASIC6.2□□□□□ -1.42
Trim47Q8C0E3 Gm29624-201ENSMUST00000190018 615 ntBASIC6.2□□□□□ -1.42
Trim47Q8C0E3 Gm28780-201ENSMUST00000190223 615 ntBASIC6.2□□□□□ -1.42
Trim47Q8C0E3 Gm28969-211ENSMUST00000190992 615 ntBASIC6.2□□□□□ -1.42
Trim47Q8C0E3 Gm28990-207ENSMUST00000191219 615 ntBASIC6.2□□□□□ -1.42
Trim47Q8C0E3 Gm36468-201ENSMUST00000192119 615 ntBASIC6.2□□□□□ -1.42
Trim47Q8C0E3 Gm31572-201ENSMUST00000193341 615 ntBASIC6.2□□□□□ -1.42
Trim47Q8C0E3 Gm30175-201ENSMUST00000194173 615 ntBASIC6.2□□□□□ -1.42
Trim47Q8C0E3 Gm30858-201ENSMUST00000195516 615 ntBASIC6.2□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms