Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Gm42909-201ENSMUST00000196982 3619 ntBASIC3.2□□□□□ -1.9
Col12a1Q60847 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Col12a1Q60847 Gm23911-201ENSMUST00000104596 134 ntBASIC3.2□□□□□ -1.9
Col12a1Q60847 Gm14816-201ENSMUST00000117174 294 ntBASIC3.2□□□□□ -1.9
Col12a1Q60847 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC3.2□□□□□ -1.9
Col12a1Q60847 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Col12a1Q60847 4933434E20Rik-201ENSMUST00000029551 3097 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Col12a1Q60847 Pgap1-201ENSMUST00000097739 10583 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Col12a1Q60847 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Col12a1Q60847 AC154386.1-201ENSMUST00000222753 2871 ntBASIC3.2□□□□□ -1.9
Col12a1Q60847 Mir466k-201ENSMUST00000116774 122 ntBASIC3.2□□□□□ -1.9
Col12a1Q60847 Gm22651-201ENSMUST00000157872 94 ntBASIC3.2□□□□□ -1.9
Col12a1Q60847 Gm23257-201ENSMUST00000158322 132 ntBASIC3.2□□□□□ -1.9
Col12a1Q60847 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Col12a1Q60847 CT009711.3-201ENSMUST00000225882 250 ntBASIC3.2□□□□□ -1.9
Col12a1Q60847 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC3.2□□□□□ -1.9
Col12a1Q60847 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC3.2□□□□□ -1.9
Col12a1Q60847 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Col12a1Q60847 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Col12a1Q60847 Gm23048-201ENSMUST00000157237 129 ntBASIC3.19□□□□□ -1.9
Col12a1Q60847 Gm25360-201ENSMUST00000178786 191 ntBASIC3.19□□□□□ -1.9
Col12a1Q60847 Gm28064-201ENSMUST00000185639 858 ntBASIC3.19□□□□□ -1.9
Col12a1Q60847 Ighv1-68-201ENSMUST00000198789 294 ntBASIC3.19□□□□□ -1.9
Col12a1Q60847 1810014B01Rik-204ENSMUST00000218536 204 ntBASIC3.19□□□□□ -1.9
Col12a1Q60847 AC167669.3-201ENSMUST00000224720 393 ntBASIC3.19□□□□□ -1.9
Col12a1Q60847 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Col12a1Q60847 Pign-201ENSMUST00000070699 6528 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Col12a1Q60847 Gm28240-201ENSMUST00000187560 2053 ntBASIC3.19□□□□□ -1.9
Col12a1Q60847 Olfr1454-204ENSMUST00000217568 4215 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Col12a1Q60847 Olfr102-202ENSMUST00000217590 2783 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Col12a1Q60847 Gm12667-201ENSMUST00000118299 1332 ntBASIC3.19□□□□□ -1.9
Col12a1Q60847 Tet1-206ENSMUST00000174189 14369 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
Col12a1Q60847 Gm23803-201ENSMUST00000104610 132 ntBASIC3.19□□□□□ -1.9
Col12a1Q60847 Gm3123-201ENSMUST00000163480 480 ntBASIC3.19□□□□□ -1.9
Col12a1Q60847 Gm18843-201ENSMUST00000194982 719 ntBASIC3.19□□□□□ -1.9
Col12a1Q60847 Gm43992-201ENSMUST00000204358 197 ntBASIC3.19□□□□□ -1.9
Col12a1Q60847 Gm44844-201ENSMUST00000207242 336 ntBASIC3.19□□□□□ -1.9
Col12a1Q60847 Sult1e1-201ENSMUST00000031201 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Col12a1Q60847 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Col12a1Q60847 Vmn1r12-201ENSMUST00000073384 924 ntAPPRIS P2 BASIC3.19□□□□□ -1.9
Col12a1Q60847 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
Col12a1Q60847 Gm2987-201ENSMUST00000187673 1693 ntBASIC3.19□□□□□ -1.9
Col12a1Q60847 Olfr826-202ENSMUST00000203720 1535 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Col12a1Q60847 Xcr1-201ENSMUST00000182350 4453 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Col12a1Q60847 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
Col12a1Q60847 Gm25808-201ENSMUST00000122784 284 ntBASIC3.19□□□□□ -1.9
Col12a1Q60847 Gm7198-201ENSMUST00000219635 1074 ntBASIC3.19□□□□□ -1.9
Col12a1Q60847 Zfp982-201ENSMUST00000063704 1244 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
Col12a1Q60847 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
Col12a1Q60847 Pbrm1-201ENSMUST00000022471 5871 ntTSL 5 BASIC3.19□□□□□ -1.9
Col12a1Q60847 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
Col12a1Q60847 Ddi1-201ENSMUST00000051706 7114 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Col12a1Q60847 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Col12a1Q60847 Gm15262-202ENSMUST00000207320 5010 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Col12a1Q60847 Nck1-201ENSMUST00000112874 1513 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Col12a1Q60847 Gm14810-201ENSMUST00000121628 486 ntBASIC3.18□□□□□ -1.9
Col12a1Q60847 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC3.18□□□□□ -1.9
Col12a1Q60847 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC3.18□□□□□ -1.9
Col12a1Q60847 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC3.18□□□□□ -1.9
Col12a1Q60847 Gm5176-202ENSMUST00000220267 583 ntBASIC3.18□□□□□ -1.9
Col12a1Q60847 AC168062.3-201ENSMUST00000227025 165 ntBASIC3.18□□□□□ -1.9
Col12a1Q60847 Gm4070-202ENSMUST00000176467 9007 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Col12a1Q60847 Nptn-205ENSMUST00000176250 4531 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Col12a1Q60847 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
Col12a1Q60847 Ptprd-218ENSMUST00000174180 5694 ntTSL 5 BASIC3.18□□□□□ -1.9
Col12a1Q60847 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Col12a1Q60847 Gm5943-201ENSMUST00000119458 459 ntBASIC3.18□□□□□ -1.9
Col12a1Q60847 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC3.18□□□□□ -1.9
Col12a1Q60847 Gm22666-201ENSMUST00000158717 164 ntBASIC3.18□□□□□ -1.9
Col12a1Q60847 Gm5926-201ENSMUST00000177740 711 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Col12a1Q60847 Gm5798-202ENSMUST00000179987 582 ntTSL 3 BASIC3.18□□□□□ -1.9
Col12a1Q60847 1600010M07Rik-201ENSMUST00000185931 1204 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Col12a1Q60847 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC3.18□□□□□ -1.9
Col12a1Q60847 AC134864.1-201ENSMUST00000226326 511 ntBASIC3.18□□□□□ -1.9
Col12a1Q60847 Vmn1r220-203ENSMUST00000227679 7868 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Col12a1Q60847 Vmn1r220-206ENSMUST00000228854 7854 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Col12a1Q60847 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC3.18□□□□□ -1.9
Col12a1Q60847 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Col12a1Q60847 Cfap54-207ENSMUST00000168110 9903 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
Col12a1Q60847 Gm28574-201ENSMUST00000185757 699 ntBASIC3.17□□□□□ -1.9
Col12a1Q60847 Gm28596-201ENSMUST00000185870 696 ntBASIC3.17□□□□□ -1.9
Col12a1Q60847 Gm28397-201ENSMUST00000187970 699 ntBASIC3.17□□□□□ -1.9
Col12a1Q60847 Gm29525-201ENSMUST00000189844 699 ntBASIC3.17□□□□□ -1.9
Col12a1Q60847 Gm29523-201ENSMUST00000191415 699 ntBASIC3.17□□□□□ -1.9
Col12a1Q60847 Gm32295-201ENSMUST00000192558 696 ntBASIC3.17□□□□□ -1.9
Col12a1Q60847 Gm31260-201ENSMUST00000193478 696 ntBASIC3.17□□□□□ -1.9
Col12a1Q60847 Gm43899-201ENSMUST00000203675 246 ntBASIC3.17□□□□□ -1.9
Col12a1Q60847 Gm6064-201ENSMUST00000203999 454 ntBASIC3.17□□□□□ -1.9
Col12a1Q60847 Gm18000-201ENSMUST00000212153 800 ntBASIC3.17□□□□□ -1.9
Col12a1Q60847 AC154552.3-201ENSMUST00000220741 444 ntTSL 5 BASIC3.17□□□□□ -1.9
Col12a1Q60847 AC166369.3-201ENSMUST00000227286 409 ntBASIC3.17□□□□□ -1.9
Col12a1Q60847 4930568D16Rik-201ENSMUST00000028243 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Col12a1Q60847 Alkbh8-204ENSMUST00000211933 7674 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
Col12a1Q60847 Carf-209ENSMUST00000187978 5463 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
Col12a1Q60847 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
Col12a1Q60847 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Col12a1Q60847 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
Col12a1Q60847 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Col12a1Q60847 Gm12222-201ENSMUST00000121368 260 ntBASIC3.17□□□□□ -1.9
Col12a1Q60847 Gm22500-201ENSMUST00000158982 99 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms