Protein–RNA interactions for Protein: Q9CQI6

Cotl1, Coactosin-like protein, mousemouse

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cotl1Q9CQI6 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Cotl1Q9CQI6 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Cotl1Q9CQI6 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cotl1Q9CQI6 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Cotl1Q9CQI6 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cotl1Q9CQI6 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
Cotl1Q9CQI6 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cotl1Q9CQI6 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cotl1Q9CQI6 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cotl1Q9CQI6 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cotl1Q9CQI6 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cotl1Q9CQI6 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cotl1Q9CQI6 Gm27801-201ENSMUST00000184174 223 ntBASIC13.7□□□□□ -0.22
Cotl1Q9CQI6 Appbp2os-202ENSMUST00000206972 447 ntBASIC13.7□□□□□ -0.22
Cotl1Q9CQI6 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cotl1Q9CQI6 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cotl1Q9CQI6 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cotl1Q9CQI6 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Cotl1Q9CQI6 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cotl1Q9CQI6 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC13.7□□□□□ -0.22
Cotl1Q9CQI6 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cotl1Q9CQI6 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cotl1Q9CQI6 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Cotl1Q9CQI6 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cotl1Q9CQI6 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cotl1Q9CQI6 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cotl1Q9CQI6 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
Cotl1Q9CQI6 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cotl1Q9CQI6 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cotl1Q9CQI6 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Cotl1Q9CQI6 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Cotl1Q9CQI6 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cotl1Q9CQI6 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cotl1Q9CQI6 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cotl1Q9CQI6 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cotl1Q9CQI6 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cotl1Q9CQI6 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cotl1Q9CQI6 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cotl1Q9CQI6 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Cotl1Q9CQI6 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Cotl1Q9CQI6 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cotl1Q9CQI6 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Cotl1Q9CQI6 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cotl1Q9CQI6 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Cotl1Q9CQI6 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cotl1Q9CQI6 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cotl1Q9CQI6 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cotl1Q9CQI6 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cotl1Q9CQI6 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Cotl1Q9CQI6 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cotl1Q9CQI6 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cotl1Q9CQI6 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Cotl1Q9CQI6 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cotl1Q9CQI6 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cotl1Q9CQI6 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Cotl1Q9CQI6 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cotl1Q9CQI6 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cotl1Q9CQI6 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cotl1Q9CQI6 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cotl1Q9CQI6 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cotl1Q9CQI6 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cotl1Q9CQI6 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Cotl1Q9CQI6 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cotl1Q9CQI6 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cotl1Q9CQI6 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cotl1Q9CQI6 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cotl1Q9CQI6 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Cotl1Q9CQI6 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cotl1Q9CQI6 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Cotl1Q9CQI6 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cotl1Q9CQI6 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cotl1Q9CQI6 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cotl1Q9CQI6 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cotl1Q9CQI6 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cotl1Q9CQI6 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cotl1Q9CQI6 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cotl1Q9CQI6 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Cotl1Q9CQI6 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cotl1Q9CQI6 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Cotl1Q9CQI6 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cotl1Q9CQI6 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cotl1Q9CQI6 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cotl1Q9CQI6 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Cotl1Q9CQI6 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cotl1Q9CQI6 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cotl1Q9CQI6 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cotl1Q9CQI6 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cotl1Q9CQI6 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Cotl1Q9CQI6 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cotl1Q9CQI6 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cotl1Q9CQI6 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cotl1Q9CQI6 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cotl1Q9CQI6 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cotl1Q9CQI6 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Cotl1Q9CQI6 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cotl1Q9CQI6 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Cotl1Q9CQI6 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC13.68□□□□□ -0.22
Cotl1Q9CQI6 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC13.68□□□□□ -0.22
Cotl1Q9CQI6 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cotl1Q9CQI6 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 107.4 ms