Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm22697-201ENSMUST00000175194 63 ntBASIC15.26■□□□□ 0.03
Scrt1Q99M85 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Scrt1Q99M85 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scrt1Q99M85 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scrt1Q99M85 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scrt1Q99M85 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scrt1Q99M85 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Scrt1Q99M85 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Scrt1Q99M85 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Scrt1Q99M85 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scrt1Q99M85 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scrt1Q99M85 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scrt1Q99M85 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scrt1Q99M85 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scrt1Q99M85 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scrt1Q99M85 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Scrt1Q99M85 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scrt1Q99M85 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC15.25■□□□□ 0.03
Scrt1Q99M85 Gm27463-201ENSMUST00000183569 57 ntBASIC15.25■□□□□ 0.03
Scrt1Q99M85 Gm17971-201ENSMUST00000190239 806 ntBASIC15.25■□□□□ 0.03
Scrt1Q99M85 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC15.25■□□□□ 0.03
Scrt1Q99M85 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scrt1Q99M85 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Scrt1Q99M85 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
Scrt1Q99M85 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Scrt1Q99M85 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scrt1Q99M85 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Scrt1Q99M85 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scrt1Q99M85 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scrt1Q99M85 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Scrt1Q99M85 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC15.24■□□□□ 0.03
Scrt1Q99M85 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scrt1Q99M85 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scrt1Q99M85 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scrt1Q99M85 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scrt1Q99M85 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scrt1Q99M85 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Scrt1Q99M85 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC15.24■□□□□ 0.03
Scrt1Q99M85 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scrt1Q99M85 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scrt1Q99M85 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scrt1Q99M85 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Scrt1Q99M85 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC15.24■□□□□ 0.03
Scrt1Q99M85 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC15.24■□□□□ 0.03
Scrt1Q99M85 AC133598.3-202ENSMUST00000224219 531 ntBASIC15.24■□□□□ 0.03
Scrt1Q99M85 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scrt1Q99M85 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scrt1Q99M85 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scrt1Q99M85 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC15.24■□□□□ 0.03
Scrt1Q99M85 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scrt1Q99M85 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scrt1Q99M85 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scrt1Q99M85 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scrt1Q99M85 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Scrt1Q99M85 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Scrt1Q99M85 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scrt1Q99M85 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC15.23■□□□□ 0.03
Scrt1Q99M85 Gm17661-201ENSMUST00000170317 270 ntBASIC15.23■□□□□ 0.03
Scrt1Q99M85 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Scrt1Q99M85 AC130713.1-201ENSMUST00000228853 1096 ntBASIC15.23■□□□□ 0.03
Scrt1Q99M85 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scrt1Q99M85 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Scrt1Q99M85 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
Scrt1Q99M85 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scrt1Q99M85 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Scrt1Q99M85 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC15.23■□□□□ 0.03
Scrt1Q99M85 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Scrt1Q99M85 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scrt1Q99M85 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Scrt1Q99M85 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Scrt1Q99M85 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scrt1Q99M85 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scrt1Q99M85 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scrt1Q99M85 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scrt1Q99M85 Gm44544-201ENSMUST00000207052 1844 ntBASIC15.22■□□□□ 0.03
Scrt1Q99M85 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scrt1Q99M85 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scrt1Q99M85 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scrt1Q99M85 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scrt1Q99M85 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Scrt1Q99M85 Gm2274-201ENSMUST00000184539 609 ntBASIC15.22■□□□□ 0.03
Scrt1Q99M85 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC15.22■□□□□ 0.03
Scrt1Q99M85 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Scrt1Q99M85 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scrt1Q99M85 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scrt1Q99M85 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
Scrt1Q99M85 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC15.22■□□□□ 0.03
Scrt1Q99M85 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Scrt1Q99M85 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scrt1Q99M85 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scrt1Q99M85 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scrt1Q99M85 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scrt1Q99M85 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scrt1Q99M85 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Scrt1Q99M85 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Scrt1Q99M85 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Scrt1Q99M85 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC15.21■□□□□ 0.03
Scrt1Q99M85 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Scrt1Q99M85 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scrt1Q99M85 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms