Protein–RNA interactions for Protein: Q99M51

Nck1, Cytoplasmic protein NCK1, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nck1Q99M51 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nck1Q99M51 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nck1Q99M51 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nck1Q99M51 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nck1Q99M51 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nck1Q99M51 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nck1Q99M51 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
Nck1Q99M51 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Nck1Q99M51 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nck1Q99M51 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nck1Q99M51 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nck1Q99M51 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nck1Q99M51 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nck1Q99M51 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nck1Q99M51 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nck1Q99M51 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nck1Q99M51 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.64■□□□□ 0.25
Nck1Q99M51 Gm10129-202ENSMUST00000193100 1316 ntBASIC16.64■□□□□ 0.25
Nck1Q99M51 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nck1Q99M51 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nck1Q99M51 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nck1Q99M51 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nck1Q99M51 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nck1Q99M51 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.63■□□□□ 0.25
Nck1Q99M51 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nck1Q99M51 Haglr-201ENSMUST00000100000 2085 ntBASIC16.63■□□□□ 0.25
Nck1Q99M51 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.63■□□□□ 0.25
Nck1Q99M51 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nck1Q99M51 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
Nck1Q99M51 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nck1Q99M51 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nck1Q99M51 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nck1Q99M51 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nck1Q99M51 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nck1Q99M51 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Nck1Q99M51 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nck1Q99M51 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nck1Q99M51 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Nck1Q99M51 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.63■□□□□ 0.25
Nck1Q99M51 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Nck1Q99M51 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nck1Q99M51 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nck1Q99M51 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nck1Q99M51 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nck1Q99M51 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nck1Q99M51 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nck1Q99M51 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nck1Q99M51 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nck1Q99M51 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nck1Q99M51 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nck1Q99M51 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
Nck1Q99M51 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
Nck1Q99M51 Ap3s1-204ENSMUST00000225520 957 ntBASIC16.62■□□□□ 0.25
Nck1Q99M51 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nck1Q99M51 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Nck1Q99M51 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Nck1Q99M51 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nck1Q99M51 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Nck1Q99M51 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nck1Q99M51 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nck1Q99M51 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Nck1Q99M51 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nck1Q99M51 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nck1Q99M51 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.62■□□□□ 0.25
Nck1Q99M51 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Nck1Q99M51 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nck1Q99M51 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nck1Q99M51 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nck1Q99M51 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nck1Q99M51 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nck1Q99M51 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nck1Q99M51 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nck1Q99M51 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
Nck1Q99M51 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Nck1Q99M51 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nck1Q99M51 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nck1Q99M51 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Nck1Q99M51 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nck1Q99M51 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Nck1Q99M51 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nck1Q99M51 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Nck1Q99M51 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Nck1Q99M51 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nck1Q99M51 Gm42778-201ENSMUST00000199644 553 ntBASIC16.6■□□□□ 0.25
Nck1Q99M51 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nck1Q99M51 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nck1Q99M51 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Nck1Q99M51 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nck1Q99M51 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Nck1Q99M51 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nck1Q99M51 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nck1Q99M51 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.6■□□□□ 0.25
Nck1Q99M51 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nck1Q99M51 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nck1Q99M51 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nck1Q99M51 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nck1Q99M51 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Nck1Q99M51 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
Nck1Q99M51 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nck1Q99M51 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms