Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cpsf7Q8BTV2 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cpsf7Q8BTV2 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Cpsf7Q8BTV2 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cpsf7Q8BTV2 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cpsf7Q8BTV2 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cpsf7Q8BTV2 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Cpsf7Q8BTV2 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
Cpsf7Q8BTV2 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cpsf7Q8BTV2 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cpsf7Q8BTV2 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cpsf7Q8BTV2 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cpsf7Q8BTV2 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cpsf7Q8BTV2 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cpsf7Q8BTV2 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.45■□□□□ 0.38
Cpsf7Q8BTV2 Nespas-201ENSMUST00000143738 1083 ntBASIC17.45■□□□□ 0.38
Cpsf7Q8BTV2 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.45■□□□□ 0.38
Cpsf7Q8BTV2 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cpsf7Q8BTV2 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cpsf7Q8BTV2 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cpsf7Q8BTV2 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cpsf7Q8BTV2 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cpsf7Q8BTV2 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cpsf7Q8BTV2 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cpsf7Q8BTV2 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cpsf7Q8BTV2 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cpsf7Q8BTV2 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cpsf7Q8BTV2 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cpsf7Q8BTV2 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cpsf7Q8BTV2 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cpsf7Q8BTV2 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cpsf7Q8BTV2 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cpsf7Q8BTV2 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
Cpsf7Q8BTV2 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Cpsf7Q8BTV2 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.44■□□□□ 0.38
Cpsf7Q8BTV2 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.44■□□□□ 0.38
Cpsf7Q8BTV2 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.44■□□□□ 0.38
Cpsf7Q8BTV2 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cpsf7Q8BTV2 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cpsf7Q8BTV2 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cpsf7Q8BTV2 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cpsf7Q8BTV2 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cpsf7Q8BTV2 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cpsf7Q8BTV2 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.43■□□□□ 0.38
Cpsf7Q8BTV2 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cpsf7Q8BTV2 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cpsf7Q8BTV2 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cpsf7Q8BTV2 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.43■□□□□ 0.38
Cpsf7Q8BTV2 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.43■□□□□ 0.38
Cpsf7Q8BTV2 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cpsf7Q8BTV2 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cpsf7Q8BTV2 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cpsf7Q8BTV2 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cpsf7Q8BTV2 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cpsf7Q8BTV2 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cpsf7Q8BTV2 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.42■□□□□ 0.38
Cpsf7Q8BTV2 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cpsf7Q8BTV2 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cpsf7Q8BTV2 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cpsf7Q8BTV2 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cpsf7Q8BTV2 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cpsf7Q8BTV2 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Cpsf7Q8BTV2 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Cpsf7Q8BTV2 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cpsf7Q8BTV2 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.42■□□□□ 0.38
Cpsf7Q8BTV2 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.42■□□□□ 0.38
Cpsf7Q8BTV2 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cpsf7Q8BTV2 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cpsf7Q8BTV2 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cpsf7Q8BTV2 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Cpsf7Q8BTV2 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cpsf7Q8BTV2 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cpsf7Q8BTV2 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Cpsf7Q8BTV2 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cpsf7Q8BTV2 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Cpsf7Q8BTV2 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cpsf7Q8BTV2 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Cpsf7Q8BTV2 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cpsf7Q8BTV2 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.41■□□□□ 0.38
Cpsf7Q8BTV2 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cpsf7Q8BTV2 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.41■□□□□ 0.38
Cpsf7Q8BTV2 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cpsf7Q8BTV2 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cpsf7Q8BTV2 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cpsf7Q8BTV2 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cpsf7Q8BTV2 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cpsf7Q8BTV2 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.4■□□□□ 0.38
Cpsf7Q8BTV2 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cpsf7Q8BTV2 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.4■□□□□ 0.38
Cpsf7Q8BTV2 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cpsf7Q8BTV2 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cpsf7Q8BTV2 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.4■□□□□ 0.38
Cpsf7Q8BTV2 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.4■□□□□ 0.38
Cpsf7Q8BTV2 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cpsf7Q8BTV2 Gm38285-201ENSMUST00000192928 922 ntBASIC17.4■□□□□ 0.38
Cpsf7Q8BTV2 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cpsf7Q8BTV2 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cpsf7Q8BTV2 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.4■□□□□ 0.38
Cpsf7Q8BTV2 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cpsf7Q8BTV2 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms