Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.17■□□□□ 0.5
Prpf38bQ80SY5 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Prpf38bQ80SY5 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Prpf38bQ80SY5 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.17■□□□□ 0.5
Prpf38bQ80SY5 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Prpf38bQ80SY5 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Prpf38bQ80SY5 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Prpf38bQ80SY5 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Prpf38bQ80SY5 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Prpf38bQ80SY5 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Prpf38bQ80SY5 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prpf38bQ80SY5 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Prpf38bQ80SY5 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prpf38bQ80SY5 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prpf38bQ80SY5 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prpf38bQ80SY5 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prpf38bQ80SY5 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Prpf38bQ80SY5 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Prpf38bQ80SY5 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prpf38bQ80SY5 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prpf38bQ80SY5 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prpf38bQ80SY5 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.16■□□□□ 0.5
Prpf38bQ80SY5 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prpf38bQ80SY5 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prpf38bQ80SY5 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.16■□□□□ 0.5
Prpf38bQ80SY5 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prpf38bQ80SY5 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Prpf38bQ80SY5 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Prpf38bQ80SY5 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.15■□□□□ 0.5
Prpf38bQ80SY5 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Prpf38bQ80SY5 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
Prpf38bQ80SY5 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Prpf38bQ80SY5 Gm15375-201ENSMUST00000119510 849 ntBASIC18.15■□□□□ 0.5
Prpf38bQ80SY5 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC18.15■□□□□ 0.5
Prpf38bQ80SY5 Mir5130-201ENSMUST00000175160 84 ntBASIC18.15■□□□□ 0.5
Prpf38bQ80SY5 Gm28033-201ENSMUST00000184224 96 ntBASIC18.15■□□□□ 0.5
Prpf38bQ80SY5 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC18.15■□□□□ 0.5
Prpf38bQ80SY5 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
Prpf38bQ80SY5 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.15■□□□□ 0.5
Prpf38bQ80SY5 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Prpf38bQ80SY5 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Prpf38bQ80SY5 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Prpf38bQ80SY5 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Prpf38bQ80SY5 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Prpf38bQ80SY5 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Prpf38bQ80SY5 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.5
Prpf38bQ80SY5 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Prpf38bQ80SY5 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Prpf38bQ80SY5 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Prpf38bQ80SY5 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Prpf38bQ80SY5 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Prpf38bQ80SY5 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.14■□□□□ 0.49
Prpf38bQ80SY5 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Prpf38bQ80SY5 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Prpf38bQ80SY5 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Prpf38bQ80SY5 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Prpf38bQ80SY5 Gm6443-201ENSMUST00000203599 874 ntBASIC18.14■□□□□ 0.49
Prpf38bQ80SY5 Umpk-ps-201ENSMUST00000211897 827 ntBASIC18.14■□□□□ 0.49
Prpf38bQ80SY5 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Prpf38bQ80SY5 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Prpf38bQ80SY5 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Prpf38bQ80SY5 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Prpf38bQ80SY5 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Prpf38bQ80SY5 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Prpf38bQ80SY5 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.14■□□□□ 0.49
Prpf38bQ80SY5 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.14■□□□□ 0.49
Prpf38bQ80SY5 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Prpf38bQ80SY5 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.14■□□□□ 0.49
Prpf38bQ80SY5 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Prpf38bQ80SY5 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Prpf38bQ80SY5 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Prpf38bQ80SY5 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Prpf38bQ80SY5 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Prpf38bQ80SY5 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.13■□□□□ 0.49
Prpf38bQ80SY5 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Prpf38bQ80SY5 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC18.13■□□□□ 0.49
Prpf38bQ80SY5 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Prpf38bQ80SY5 Gm37292-201ENSMUST00000192062 758 ntBASIC18.13■□□□□ 0.49
Prpf38bQ80SY5 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.13■□□□□ 0.49
Prpf38bQ80SY5 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Prpf38bQ80SY5 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Prpf38bQ80SY5 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Prpf38bQ80SY5 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Prpf38bQ80SY5 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Prpf38bQ80SY5 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Prpf38bQ80SY5 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Prpf38bQ80SY5 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Prpf38bQ80SY5 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Prpf38bQ80SY5 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Prpf38bQ80SY5 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Prpf38bQ80SY5 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Prpf38bQ80SY5 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Prpf38bQ80SY5 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.12■□□□□ 0.49
Prpf38bQ80SY5 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Prpf38bQ80SY5 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Prpf38bQ80SY5 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Prpf38bQ80SY5 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.12■□□□□ 0.49
Prpf38bQ80SY5 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Prpf38bQ80SY5 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Prpf38bQ80SY5 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms