Protein–RNA interactions for Protein: Q5U430

Ubr3, E3 ubiquitin-protein ligase UBR3, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3Q5U430 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC21.22■□□□□ 0.99
Ubr3Q5U430 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ubr3Q5U430 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ubr3Q5U430 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ubr3Q5U430 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC21.21■□□□□ 0.99
Ubr3Q5U430 Gm43272-201ENSMUST00000200599 1584 ntBASIC21.21■□□□□ 0.99
Ubr3Q5U430 Mir5126-201ENSMUST00000175513 77 ntBASIC21.21■□□□□ 0.99
Ubr3Q5U430 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ubr3Q5U430 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC21.21■□□□□ 0.99
Ubr3Q5U430 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ubr3Q5U430 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ubr3Q5U430 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ubr3Q5U430 Golph3-205ENSMUST00000228671 2842 ntBASIC21.21■□□□□ 0.99
Ubr3Q5U430 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC21.2■□□□□ 0.99
Ubr3Q5U430 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ubr3Q5U430 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ubr3Q5U430 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ubr3Q5U430 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
Ubr3Q5U430 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ubr3Q5U430 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ubr3Q5U430 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ubr3Q5U430 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ubr3Q5U430 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC21.2■□□□□ 0.98
Ubr3Q5U430 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ubr3Q5U430 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ubr3Q5U430 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ubr3Q5U430 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
Ubr3Q5U430 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ubr3Q5U430 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Ubr3Q5U430 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ubr3Q5U430 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ubr3Q5U430 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ubr3Q5U430 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ubr3Q5U430 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ubr3Q5U430 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Ubr3Q5U430 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ubr3Q5U430 Phf7-203ENSMUST00000226565 1971 ntBASIC21.19■□□□□ 0.98
Ubr3Q5U430 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC21.19■□□□□ 0.98
Ubr3Q5U430 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ubr3Q5U430 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ubr3Q5U430 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Ubr3Q5U430 Gm13186-201ENSMUST00000118031 316 ntBASIC21.18■□□□□ 0.98
Ubr3Q5U430 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ubr3Q5U430 Cmtm5-203ENSMUST00000227441 610 ntBASIC21.18■□□□□ 0.98
Ubr3Q5U430 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ubr3Q5U430 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ubr3Q5U430 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ubr3Q5U430 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ubr3Q5U430 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Ubr3Q5U430 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC21.18■□□□□ 0.98
Ubr3Q5U430 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC21.18■□□□□ 0.98
Ubr3Q5U430 Gm18195-201ENSMUST00000207604 706 ntBASIC21.18■□□□□ 0.98
Ubr3Q5U430 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ubr3Q5U430 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ubr3Q5U430 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ubr3Q5U430 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Ubr3Q5U430 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ubr3Q5U430 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC21.17■□□□□ 0.98
Ubr3Q5U430 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ubr3Q5U430 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ubr3Q5U430 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Ubr3Q5U430 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC21.17■□□□□ 0.98
Ubr3Q5U430 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC21.17■□□□□ 0.98
Ubr3Q5U430 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Ubr3Q5U430 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ubr3Q5U430 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC21.17■□□□□ 0.98
Ubr3Q5U430 Gm18421-201ENSMUST00000204122 625 ntBASIC21.17■□□□□ 0.98
Ubr3Q5U430 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ubr3Q5U430 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ubr3Q5U430 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC21.17■□□□□ 0.98
Ubr3Q5U430 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ubr3Q5U430 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ubr3Q5U430 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Ubr3Q5U430 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ubr3Q5U430 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ubr3Q5U430 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC21.16■□□□□ 0.98
Ubr3Q5U430 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ubr3Q5U430 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ubr3Q5U430 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ubr3Q5U430 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC21.15■□□□□ 0.98
Ubr3Q5U430 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ubr3Q5U430 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ubr3Q5U430 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ubr3Q5U430 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ubr3Q5U430 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ubr3Q5U430 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ubr3Q5U430 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ubr3Q5U430 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Ubr3Q5U430 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Ubr3Q5U430 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ubr3Q5U430 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ubr3Q5U430 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC21.14■□□□□ 0.97
Ubr3Q5U430 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Ubr3Q5U430 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Ubr3Q5U430 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ubr3Q5U430 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ubr3Q5U430 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ubr3Q5U430 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ubr3Q5U430 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ubr3Q5U430 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms