Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim80Q3V061 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim80Q3V061 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim80Q3V061 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim80Q3V061 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim80Q3V061 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim80Q3V061 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim80Q3V061 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim80Q3V061 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim80Q3V061 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim80Q3V061 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim80Q3V061 Gm5408-201ENSMUST00000197998 747 ntBASIC17.98■□□□□ 0.47
Trim80Q3V061 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.98■□□□□ 0.47
Trim80Q3V061 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim80Q3V061 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim80Q3V061 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim80Q3V061 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trim80Q3V061 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim80Q3V061 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trim80Q3V061 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trim80Q3V061 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim80Q3V061 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim80Q3V061 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim80Q3V061 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Trim80Q3V061 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim80Q3V061 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trim80Q3V061 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Trim80Q3V061 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.97■□□□□ 0.47
Trim80Q3V061 Tgds-204ENSMUST00000228543 1594 ntBASIC17.97■□□□□ 0.47
Trim80Q3V061 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim80Q3V061 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim80Q3V061 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trim80Q3V061 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim80Q3V061 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.97■□□□□ 0.47
Trim80Q3V061 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim80Q3V061 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Trim80Q3V061 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim80Q3V061 Gm13148-201ENSMUST00000118892 745 ntBASIC17.97■□□□□ 0.47
Trim80Q3V061 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim80Q3V061 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim80Q3V061 Gm6365-201ENSMUST00000054711 744 ntBASIC17.97■□□□□ 0.47
Trim80Q3V061 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Trim80Q3V061 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim80Q3V061 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.97■□□□□ 0.47
Trim80Q3V061 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim80Q3V061 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trim80Q3V061 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim80Q3V061 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim80Q3V061 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim80Q3V061 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Trim80Q3V061 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trim80Q3V061 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.96■□□□□ 0.47
Trim80Q3V061 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trim80Q3V061 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trim80Q3V061 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim80Q3V061 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim80Q3V061 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Trim80Q3V061 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Trim80Q3V061 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Trim80Q3V061 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim80Q3V061 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim80Q3V061 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Trim80Q3V061 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim80Q3V061 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim80Q3V061 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim80Q3V061 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim80Q3V061 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim80Q3V061 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim80Q3V061 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Trim80Q3V061 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim80Q3V061 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim80Q3V061 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trim80Q3V061 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
Trim80Q3V061 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim80Q3V061 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.95■□□□□ 0.46
Trim80Q3V061 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.95■□□□□ 0.46
Trim80Q3V061 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trim80Q3V061 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim80Q3V061 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim80Q3V061 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim80Q3V061 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim80Q3V061 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trim80Q3V061 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim80Q3V061 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim80Q3V061 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Trim80Q3V061 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trim80Q3V061 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim80Q3V061 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Trim80Q3V061 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim80Q3V061 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim80Q3V061 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim80Q3V061 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim80Q3V061 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim80Q3V061 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Trim80Q3V061 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.94■□□□□ 0.46
Trim80Q3V061 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim80Q3V061 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.94■□□□□ 0.46
Trim80Q3V061 Gm8969-201ENSMUST00000199694 526 ntBASIC17.94■□□□□ 0.46
Trim80Q3V061 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.94■□□□□ 0.46
Trim80Q3V061 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms